DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GlyT and Slc6a2

DIOPT Version :10

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_033235.3 Gene:Slc6a2 / 20538 MGIID:1270850 Length:617 Species:Mus musculus


Alignment Length:616 Identity:253/616 - (41%)
Similarity:354/616 - (57%) Gaps:44/616 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GGGVVCPSTAISGCASGTALIQLDATGPGAGGAGESE--HERGTWTGRFDFLLSLLGYSVGLGNV 80
            ||....|...:..|.:...|:..:..|.....|.:..  ..|.||..:.|||||::|::|.|.||
Mouse    15 GGADPLPEQPLRPCKTADLLVVKERNGVQCLLASQDSDAQPRETWGKKIDFLLSVVGFAVDLANV 79

  Fly    81 WRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMIL 145
            ||||||||.|||||||||:|:.|:|||:||.:|||:.|||...|...|: :.||.|:|:|..:||
Mouse    80 WRFPYLCYKNGGGAFLIPYTLFLIIAGMPLFYMELALGQYNREGAATVW-KICPFFKGVGYAVIL 143

  Fly   146 VSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHN 210
            ::..|..|||:||||:::|:||||...|||.||..:|::..|......:.....:.|.|.:    
Mouse   144 IALYVGFYYNVIIAWSLYYLFASFTLNLPWTNCGHSWNSPNCTDPKLLNASVLGDHTKYSK---- 204

  Fly   211 ATSAAENNITTLALGALKRPPAEEYFNNFVLGL--SKGIEETGSIKLSLAACLFLAWTIVFLCLC 273
                            .|..||.|::...||.|  |.||.:.|..:..|..||.:...:::..|.
Mouse   205 ----------------YKFTPAAEFYERGVLHLHESSGIHDIGLPQWQLLLCLMVVIVVLYFSLW 253

  Fly   274 KGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFA 338
            |||::|||||:.||..||.||.:|.|.||||||||.||..||..|:.:|..|.||.|||.||||:
Mouse   254 KGVKTSGKVVWITATLPYFVLFVLLVHGVTLPGASNGINAYLHIDFYRLKEATVWIDAATQIFFS 318

  Fly   339 LSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVVDQG 403
            |...:|.||..:|||||.||||:|:|:.:..|..|||.:|..||||:|::|||..|::|.|..:|
Mouse   319 LGAGFGVLIAFASYNKFDNNCYRDALLTSTINCVTSFISGFAIFSILGYMAHEHKVNIEDVATEG 383

  Fly   404 AGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDRFPNLRQYKIWVVLS 468
            |||.||:|||.::.|..|..||||||:|||.|||||....||.|.|.:.|.|..|::::......
Mouse   384 AGLVFILYPEAISTLSGSTFWAVLFFLMLLALGLDSSMGGMEAVITGLADDFQVLKRHRKLFTCV 448

  Fly   469 VAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIYGSQRFLNDIQGMIGKRS 533
            |.|..::..|...|..|:|.|.|:|.:||..|:|...:.|.|.::|.||..||.||||.|:|.:.
Mouse   449 VTISTFLLALFCITKGGIYVLTLLDTFAAGTSILFAVLMEAIGVSWFYGVDRFSNDIQQMMGFKP 513

  Fly   534 WFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYGHYVYPMWADAVGWIVG-----LLPVLVI- 592
               ..:|.:.|::::||.|||::..:.:.:||..|..|.||.||:.|||.:.     |:|..|| 
Mouse   514 ---GLYWRLCWKFVSPAFLLFVVVVSIINFKPLTYDDYTYPPWANWVGWGIALSSMILVPAYVIY 575

  Fly   593 -FLVAFQEIWRAPMSLSFRDRIKHLLQPTAE 622
             ||.....:|         :|:.:.:.|..|
Mouse   576 KFLSIRGSLW---------ERVAYGITPENE 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..597 CDD:395155 242/548 (44%)
Herpes_BLLF1 <884..1135 CDD:282904
Slc6a2NP_033235.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 2/5 (40%)
SLC5-6-like_sbd 56..615 CDD:444915 246/575 (43%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.