DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and snf-10

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_505682.2 Gene:snf-10 / 191769 WormBaseID:WBGene00004909 Length:673 Species:Caenorhabditis elegans


Alignment Length:668 Identity:171/668 - (25%)
Similarity:295/668 - (44%) Gaps:100/668 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 STAIS--GCASGTAL----IQLDATGPGAGGAGESEHERGTWTGRFDFLLSLLGYSVGLGNVWRF 83
            :||||  |..|.|.|    |.||           ::.|..|||.:::.:.:.|.:....||:|.|
 Worm    50 ATAISNIGFKSVTNLALENIGLD-----------TKMEGPTWTSKWEAITATLSFVTCSGNIWFF 103

  Fly    84 PYLC--YNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGM--I 144
            ||||  |   ||.|...||...|...:||:::|.:.||||:..|::|:.|..|...||..||  |
 Worm   104 PYLCGYY---GGWFPYQFTFCYVFIAVPLLYLETALGQYASASPLSVFSRMAPAMAGLSAGMCFI 165

  Fly   145 LVSAIVMLYYNLIIAWTIF-YMFASFAPVLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYL--- 205
            :|...:.|....|...||| :...|.....||::|:.:.|..||.:|..:.:|     |:..   
 Worm   166 MVFRTISLSVWAIYDLTIFTHASQSIWSTSPWESCQESQSGDYCVNYKLSSKC-----TWIQPGS 225

  Fly   206 -RTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGL--SKGI-----EETGSIKLSLAACLF 262
             :.|   ....|..|.|......|.|     |.:||.||  .:.|     |......:..|.|| 
 Worm   226 DKEC---DEYQEMLIATRGFQQRKSP-----FMSFVHGLMYKRSITMNDWEPPSVTSIICAVCL- 281

  Fly   263 LAWTIVFLCLCKGVQSSGK--VVYFTALFPYVVLVILFVRGVTLPGASTGI---LFYLT----PD 318
              |.|:.:....|.:..|:  :|..|.|.  |..::|...|::| ..:|.:   .||.:    ..
 Worm   282 --WIIIGIISIGGSKVLGRTGIVALTLLL--VGTIMLLSYGMSL-NDTTNVFTAFFYQSEGYEDK 341

  Fly   319 WKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFS 383
            |..:.:   |.|||.....||:...||:...:|.|.|.|..::|.|:::..:.......||:.|.
 Worm   342 WMWVWS---WADAAAHALRALNVGCGGIQKFASLNNFHNKIHRDVLLISIVSFVFYICTGLLSFM 403

  Fly   384 IIGFLAHELNVDVE--KVVDQGAGLAFI--VYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALM 444
            .:..:......|:|  :.:...|....|  |..|::|...:..:|..||::.|....:....:.:
 Worm   404 FMAEIGRLYYPDLEASERIQLYATPVMIESVISEILTNSSMGSIWVFLFWLTLAACSIQGISSYI 468

  Fly   445 ETVTTAILDRFPNLRQ---------YKIWVVLSV-AIFGYIGGLGFTTNSGMYWLQLMDKYAANW 499
            ..:::.|::|....|:         :|..::|:: ::.|.|..|.|..|.|:..:..::.: |::
 Worm   469 WVISSMIVERLNGSRRKYGKALASWHKRAIILAIMSVTGLISSLPFLGNGGINLMSSIETF-ASY 532

  Fly   500 SVLLIAISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVEYK 564
            ..:.||..|.|.::::||.:||..:|:.|||... ..|.||.:.|..|:| .||.:.|...|...
 Worm   533 GTIFIAFVEVITVSYVYGFKRFSVNIRAMIGGHG-PPNVFWWLNWLVISP-ILLIVTFGCIVATF 595

  Fly   565 PAKYGHYVYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRIKH------LLQPTAEW 623
            ..|.......:.:|.:|:.:.::|.:.:.|...::.:         ||.|:      :::.|.:|
 Worm   596 GQKKAFNENSIVSDPIGYSLLVMPCIFVILYFLRDEY---------DRRKNMEPFVVMIRATGDW 651

  Fly   624 GPAGRPCVNLHAERYQSQ 641
            ||. .|....:|.:::.|
 Worm   652 GPM-NPEDRRNAVKFERQ 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 149/584 (26%)
snf-10NP_505682.2 SNF 78..628 CDD:264495 149/577 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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