DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and snf-9

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_503077.2 Gene:snf-9 / 178512 WormBaseID:WBGene00004908 Length:713 Species:Caenorhabditis elegans


Alignment Length:660 Identity:213/660 - (32%)
Similarity:329/660 - (49%) Gaps:92/660 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 AGGAGESEHE-----RGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIA 106
            :|.:.|.|..     ||.|..:.:||||.||.:|||||:||||...|||||.|||:|:....::.
 Worm    36 SGSSKEIEESQADPCRGAWGNQIEFLLSTLGMAVGLGNIWRFPTRAYNNGGSAFLVPYVACALLF 100

  Fly   107 GLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFAS--F 169
            |||.:::|...|||.......::|||.|:.:|:|...:.||::|.:||.:||.|:..|| ||  .
 Worm   101 GLPAVYLEFLLGQYHRTTAPIIFRRFAPILQGVGWMAVAVSSLVAIYYIIIIGWSTVYM-ASIVM 164

  Fly   170 APVLPWQNCEPAW-STKYCFSYAQADQCEATNGT--------------------YYLRT-CHNAT 212
            .....|..|..:| :.:.|........|.:.|.|                    .||.| |::..
 Worm   165 GHTSKWNRCGNSWNNAESCVDSGLQPLCASFNATGNETSPVWANLSSEGRGKFYIYLNTSCYDKV 229

  Fly   213 SAAENNITTLALGALKRPPAEEYFNNFVLGLSKGIEETGSIK----LSLAACLFLAWTIVFLCLC 273
            ....|....:|       ..|:||.::|:..:.|..|..||.    ..:.||    |.||.|.|.
 Worm   230 DLEFNKTKMIA-------ATEQYFFDYVVKPTDGFLEFSSINFKSFFGMNAC----WLIVVLILW 283

  Fly   274 KGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYL-TPDWKQLANAQVWGDAAVQIFF 337
            |||...||..|.....||.::::||.||:||.||..||.:|| .|||.::.....||:|..|:.|
 Worm   284 KGVGYMGKASYVIVTLPYFIIILLFFRGITLDGAEDGIYYYLGNPDWSKVFMPATWGEALKQLCF 348

  Fly   338 ALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVVDQ 402
            :|...:||||.::|::|.:|||::|:|||...:...|...|..:||.:||||.:....|.:||:.
 Worm   349 SLGIGYGGLIGMASFSKPNNNCFRDALIVIIGDTMMSLVGGAAVFSTLGFLAKKKGCSVAEVVND 413

  Fly   403 GAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDRFPNLRQYKIWVVL 467
            |..|||:.:||.:.|:|:..:|:.|||:||..||:.::.|.:....::|.|:|.|||:.|..|.:
 Worm   414 GFSLAFVAFPEALGRMPLPELWSFLFFLMLFFLGISTEVAYVNVFCSSICDQFVNLRKRKWLVAV 478

  Fly   468 SVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIYGSQRFLNDIQGMIGK- 531
            ...:..|:.|:...|:.|.||..:.|:|||..|......:|.:::|::||.:..|.|::.|.|: 
 Worm   479 LWCLVLYVLGVVMVTDGGFYWFIMFDEYAAGVSSCCAVTAEVLIVAYVYGRRNQLADMKEMFGES 543

  Fly   532 ----RSWFWNF--FWGIMWRYITP--ATLLFILF------FNWVEYKPAKYGHYVYPMWADAVGW 582
                .||....  ::|..|.::||  .::|.:|.      :...|.||     .:||:..|.|||
 Worm   544 KNKCTSWIGQHSPYFGFNWMFVTPVLGSILIVLASIRQYPYQTDENKP-----NMYPLAFDIVGW 603

  Fly   583 IVGLLPVLVIFLVAF-----------------------QEIWRAPMSLSFRDRIKHLLQPTAE-W 623
            .|.|||:.::.:.||                       :...|...:::.:||.|..:.|..| |
 Worm   604 AVCLLPMALVPIFAFCAFVEFKRKGHDLRALFMKQRQLKSFGRIYQTMASKDRAKQKILPDREPW 668

  Fly   624 --GPAGRPCV 631
              .|.|...|
 Worm   669 DDAPTGHQFV 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 200/612 (33%)
snf-9NP_503077.2 SLC6sbd 52..577 CDD:271359 183/536 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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