DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GlyT and dat-1

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_499043.1 Gene:dat-1 / 176304 WormBaseID:WBGene00000934 Length:615 Species:Caenorhabditis elegans


Alignment Length:623 Identity:229/623 - (36%)
Similarity:359/623 - (57%) Gaps:47/623 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PSTAISGCASGTALIQLDATGPGAGGAGESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCY 88
            |...|...::|.....|...||  ......:..|..|:|:.|||||::|::|.|||:|||||||:
 Worm     9 PDEKIGRTSNGMQNATLPIDGP--VNTEPKDPAREQWSGKLDFLLSVVGFAVDLGNIWRFPYLCF 71

  Fly    89 NNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLY 153
            .||||.||||::||:::.|:||.:|||..|||...|.:..:.|.||||:|:|..:||.:..|..:
 Worm    72 KNGGGVFLIPYSIMVLLTGVPLFYMELCLGQYYRKGAITTWGRICPLFKGIGYCVILTAFYVDFF 136

  Fly   154 YNLIIAWTIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENN 218
            ||:|:||.:.|::.||:..|||.:|..::::..|:....::     :||...|:.:.:.||.   
 Worm   137 YNVILAWGLHYLYTSFSFNLPWASCNNSYNSPACYEPHWSE-----DGTAMCRSANQSVSAE--- 193

  Fly   219 ITTLALGALKRPPAEEYFNNFVLGLS----------KGIEETGSIKLSLAACLFLAWTIVFLCLC 273
                     |...|||||....|||.          :.:.:.|:::..:|..||:.:.|.:..:.
 Worm   194 ---------KISAAEEYFYKGFLGLHEANAPNSHVIRSVTDLGNVRWDIALSLFVVYLICYFSMW 249

  Fly   274 KGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFA 338
            ||:.:|||||:||||||||||.|||:|||||||...||.:||.|:::.|....||.|||.|:||:
 Worm   250 KGIHTSGKVVWFTALFPYVVLGILFIRGVTLPGWQNGIEYYLRPNFEMLKRPSVWQDAATQVFFS 314

  Fly   339 LSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVVDQG 403
            |.|.:|.|:..||||.|.||.|.|:|..:|.|.||||.:|.||||::|:::.:....:|.|..:|
 Worm   315 LGPGFGVLMAYSSYNDFHNNVYVDALFTSFINCATSFLSGFVIFSVLGYMSCKSGKPIEAVAQEG 379

  Fly   404 AGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDRFPNLRQYKIWVVLS 468
            .||.|:||||.::.:|.:|.|:||||:||:||||||.|...|.:.|.:.|.||.|::.:...|..
 Worm   380 PGLVFVVYPEALSTMPYAPFWSVLFFLMLMTLGLDSSFGGSEAIITGLSDEFPILKKNREVFVGC 444

  Fly   469 VAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIYGSQRFLNDIQGMIGKRS 533
            :..|..:.|:...|..|:..::.:..|...|.:|:....|.::||:|||.::|::|::.|:|.|.
 Worm   445 LFAFYMVIGIAMCTEGGILIMEWLIIYGTTWGLLIAVFCEAMVIAYIYGLRQFVHDVKEMMGFRP 509

  Fly   534 WFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYGHYVYPMWADAVGWIVGL-----LPVLVIF 593
               ..:|...|....|..||.::..|::.|:...|..|.||..|:.:|.|..|     :|::.|:
 Worm   510 ---GNYWKFCWSCAAPFILLSMITSNFINYQALTYQDYTYPTAANVIGIIFALSGASFIPLVGIY 571

  Fly   594 LV------AFQEIWRAPMSLSFRDR---IKHLLQPTAE 622
            ..      ...|.|:. :::.:|.|   .:::..||.:
 Worm   572 KFVNARGNTISEKWQR-VTMPYRKRPNQTEYIPIPTTQ 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 219/566 (39%)
dat-1NP_499043.1 SLC6sbd_SERT-like_u1 40..591 CDD:271405 219/571 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.