DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and mod-5

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_491095.3 Gene:mod-5 / 171879 WormBaseID:WBGene00003387 Length:671 Species:Caenorhabditis elegans


Alignment Length:586 Identity:223/586 - (38%)
Similarity:329/586 - (56%) Gaps:62/586 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PSTAISGCASGTALIQLDATGPGAGGA--GESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYL 86
            |..|:.|         |..|..|...|  ..|...|..|..:.:|||:::||:|.|||:||||.:
 Worm    74 PIAALGG---------LTPTKEGRVAALRRRSSMVRDKWATKMEFLLAVVGYAVDLGNIWRFPSV 129

  Fly    87 CYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVM 151
            ||.:||||||||:.|||:|.|||:.:|||..||:...|.|:::|:.||||||:|.|:..:...:.
 Worm   130 CYKHGGGAFLIPYFIMLMIGGLPMFYMELVLGQFHRSGCVSIWRKVCPLFRGIGYGICCICTFIA 194

  Fly   152 LYYNLIIAWTIFYMFASFAPV----LPWQNCEPAWSTKYCFSYAQADQCEAT---NGTYYLRTCH 209
            ::||.|||..:::...|.:.:    :||.:|...|:|..|     :|....|   |||       
 Worm   195 IFYNAIIAQAVYFAIVSLSKIWDSEVPWASCGNPWNTPRC-----SDDLNVTISRNGT------- 247

  Fly   210 NATSAAENNITTLALGALKRPPAEEYFNNFVLGLSK--GIEETGSIKLSLAACLFLAWTIVFLCL 272
                    .:||         |:|||:...||.:.|  |.::.|.:|.|:|.||...:.:|:..|
 Worm   248 --------PLTT---------PSEEYYLYKVLEVQKSTGFDDLGGVKTSMAVCLLAVFIMVYFAL 295

  Fly   273 CKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFF 337
            .||.|||||:|:.||..||::|.||.:||:.||||..|:.:|:|||:::|.:..||..||.||||
 Worm   296 WKGPQSSGKIVWVTATAPYIILSILLIRGLLLPGAKNGLYYYVTPDFEKLKDPAVWSAAATQIFF 360

  Fly   338 ALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVV-D 401
            :|.|.:|.|:.|||||.|:||||:|::..:..|.|||||:|.|:||.:|:::...|..:.:|| :
 Worm   361 SLGPGFGVLLALSSYNDFNNNCYRDAVTTSIINCATSFFSGCVVFSTLGYMSLLTNKPINEVVGE 425

  Fly   402 QGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDRFPNLRQYKIWVV 466
            ..|.|.|||||:.:..:..|..|:.:|||||:|||:||.||.:|...|...|....|.:.:.|.|
 Worm   426 HDASLIFIVYPQALATMDYSCFWSFIFFVMLITLGIDSTFAGIEAFITGFCDESRFLSKNRKWFV 490

  Fly   467 LSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIYGSQRFLNDIQGMIGK 531
            |.:.|..|.......:..|.:.:..:|:|..:.|||.|...|.|.:.|.||..:|..||:.|:| 
 Worm   491 LVICIIYYFLSFPAISYGGQFVIPFLDEYGVSLSVLFIVTCEMIAVCWFYGVDQFSKDIRAMLG- 554

  Fly   532 RSWFWNFFWGIMWRYITPATLLFI--LFFNWV---EYKPAKYGHYVYPMWADAVGWIVGLLPVLV 591
                  |:.||.||.....:.:||  :|...|   .:||.:...|.:|.|:..:||.:.||.||.
 Worm   555 ------FYPGIYWRVCWTCSPVFISVIFIMTVYNSSFKPIQMASYTFPWWSVILGWFLRLLSVLA 613

  Fly   592 I 592
            |
 Worm   614 I 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 215/551 (39%)
mod-5NP_491095.3 SLC6sbd_SERT-like 100..639 CDD:271388 215/551 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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