DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and mod-5

DIOPT Version :10

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_491095.3 Gene:mod-5 / 171879 WormBaseID:WBGene00003387 Length:671 Species:Caenorhabditis elegans


Alignment Length:586 Identity:223/586 - (38%)
Similarity:329/586 - (56%) Gaps:62/586 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PSTAISGCASGTALIQLDATGPGAGGA--GESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYL 86
            |..|:.|         |..|..|...|  ..|...|..|..:.:|||:::||:|.|||:||||.:
 Worm    74 PIAALGG---------LTPTKEGRVAALRRRSSMVRDKWATKMEFLLAVVGYAVDLGNIWRFPSV 129

  Fly    87 CYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVM 151
            ||.:||||||||:.|||:|.|||:.:|||..||:...|.|:::|:.||||||:|.|:..:...:.
 Worm   130 CYKHGGGAFLIPYFIMLMIGGLPMFYMELVLGQFHRSGCVSIWRKVCPLFRGIGYGICCICTFIA 194

  Fly   152 LYYNLIIAWTIFYMFASFAPV----LPWQNCEPAWSTKYCFSYAQADQCEAT---NGTYYLRTCH 209
            ::||.|||..:::...|.:.:    :||.:|...|:|..|     :|....|   |||       
 Worm   195 IFYNAIIAQAVYFAIVSLSKIWDSEVPWASCGNPWNTPRC-----SDDLNVTISRNGT------- 247

  Fly   210 NATSAAENNITTLALGALKRPPAEEYFNNFVLGLSK--GIEETGSIKLSLAACLFLAWTIVFLCL 272
                    .:||         |:|||:...||.:.|  |.::.|.:|.|:|.||...:.:|:..|
 Worm   248 --------PLTT---------PSEEYYLYKVLEVQKSTGFDDLGGVKTSMAVCLLAVFIMVYFAL 295

  Fly   273 CKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFF 337
            .||.|||||:|:.||..||::|.||.:||:.||||..|:.:|:|||:::|.:..||..||.||||
 Worm   296 WKGPQSSGKIVWVTATAPYIILSILLIRGLLLPGAKNGLYYYVTPDFEKLKDPAVWSAAATQIFF 360

  Fly   338 ALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVV-D 401
            :|.|.:|.|:.|||||.|:||||:|::..:..|.|||||:|.|:||.:|:::...|..:.:|| :
 Worm   361 SLGPGFGVLLALSSYNDFNNNCYRDAVTTSIINCATSFFSGCVVFSTLGYMSLLTNKPINEVVGE 425

  Fly   402 QGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDRFPNLRQYKIWVV 466
            ..|.|.|||||:.:..:..|..|:.:|||||:|||:||.||.:|...|...|....|.:.:.|.|
 Worm   426 HDASLIFIVYPQALATMDYSCFWSFIFFVMLITLGIDSTFAGIEAFITGFCDESRFLSKNRKWFV 490

  Fly   467 LSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIYGSQRFLNDIQGMIGK 531
            |.:.|..|.......:..|.:.:..:|:|..:.|||.|...|.|.:.|.||..:|..||:.|:| 
 Worm   491 LVICIIYYFLSFPAISYGGQFVIPFLDEYGVSLSVLFIVTCEMIAVCWFYGVDQFSKDIRAMLG- 554

  Fly   532 RSWFWNFFWGIMWRYITPATLLFI--LFFNWV---EYKPAKYGHYVYPMWADAVGWIVGLLPVLV 591
                  |:.||.||.....:.:||  :|...|   .:||.:...|.:|.|:..:||.:.||.||.
 Worm   555 ------FYPGIYWRVCWTCSPVFISVIFIMTVYNSSFKPIQMASYTFPWWSVILGWFLRLLSVLA 613

  Fly   592 I 592
            |
 Worm   614 I 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..597 CDD:395155 215/551 (39%)
Herpes_BLLF1 <884..1135 CDD:282904
mod-5NP_491095.3 SLC6sbd_SERT-like 100..639 CDD:271388 215/551 (39%)
Blue background indicates that the domain is not in the aligned region.

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