DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and Slc6a13

DIOPT Version :10

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_006237280.2 Gene:Slc6a13 / 171163 RGDID:620788 Length:608 Species:Rattus norvegicus


Alignment Length:598 Identity:244/598 - (40%)
Similarity:351/598 - (58%) Gaps:66/598 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 ERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQY 120
            ||..||.:.:|:||:.|..:|||||||||||||.||||||.||:.|.|...|:|:.|:|.:.|||
  Rat    31 EREQWTNKMEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYLIFLFTCGIPVFFLETALGQY 95

  Fly   121 AALGPVAVYRRFCPLFR------GLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCE 179
            ...|.:..:|:.||:|.      |:|....::.:::.:||.:::||.:||:|:||...|||.:|.
  Rat    96 TNQGGITAWRKICPIFEASVPSPGIGYASQMIVSLLNVYYIVVLAWALFYLFSSFTTDLPWGSCS 160

  Fly   180 PAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGLS 244
            ..|:|:.|..:      :.||.:..: |..||||                 |..|::...||.:|
  Rat   161 HEWNTENCVEF------QKTNNSLNV-TSENATS-----------------PVIEFWERRVLKIS 201

  Fly   245 KGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGAST 309
            .||:..||::..|..||.|||.|.:.|:.|||:|:||||||||.|||::||:|.:||||||||:.
  Rat   202 DGIQHLGSLRWELVLCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLVVLLIRGVTLPGAAQ 266

  Fly   310 GILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATS 374
            ||.|||.|:..:|.:.|||.||..||||:.:...|.|..|.||||:.||||:|.:.:...|.:||
  Rat   267 GIQFYLYPNITRLWDPQVWMDAGTQIFFSFAICLGCLTALGSYNKYHNNCYRDCVALCILNSSTS 331

  Fly   375 FFAGLVIFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDS 439
            |.||..||||:||::.|..|.:.:|.:.|.|||||.||..|..||.||:||..||.|::.|||||
  Rat   332 FVAGFAIFSILGFMSQEQGVPISEVAESGPGLAFIAYPRAVVMLPFSPLWACCFFFMVVLLGLDS 396

  Fly   440 QFALMETVTTAILDRFP------NLRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAAN 498
            ||..:|::.||::|.:|      |.|:.   ::|.|::..:..||...|..|||..||.|.|||:
  Rat   397 QFVCVESLVTALVDMYPRVFRKKNRREI---LILIVSVVSFFIGLIMLTEGGMYVFQLFDYYAAS 458

  Fly   499 WSVLL-IAISECILIAWIYGSQRFLNDIQGMIGKRSW-----FWNFFWGIMWRYITPATLLFILF 557
            ...|| :||.|.:.:||:||:.||.::|:.|||.:.|     .|.||        |||..|....
  Rat   459 GMCLLFVAIFESLCVAWVYGASRFYDNIEDMIGYKPWPLIKYCWLFF--------TPAVCLATFL 515

  Fly   558 FNWVEYKPAKYG-HYVYPMWADAVGWIVGL-----LPVLVIFLVAFQEIWRAPMSLSFRDRIKHL 616
            |:.::|.|..|. .|.||.|.||:||::.|     :|...|:.:   ...:.|:    |:|::.|
  Rat   516 FSLIKYTPLTYNKKYTYPWWGDALGWLLALSSMVCIPAWSIYKL---RTLKGPL----RERLRQL 573

  Fly   617 LQPTAEWGPAGRP 629
            :.|..:.....:|
  Rat   574 VCPAEDLPQKSQP 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..597 CDD:395155 237/563 (42%)
Herpes_BLLF1 <884..1135 CDD:282904
Slc6a13XP_006237280.2 SLC5-6-like_sbd 32..581 CDD:444915 242/590 (41%)
Blue background indicates that the domain is not in the aligned region.

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