DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and Slc6a7

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_446448.2 Gene:Slc6a7 / 117100 RGDID:620928 Length:637 Species:Rattus norvegicus


Alignment Length:627 Identity:276/627 - (44%)
Similarity:401/627 - (63%) Gaps:51/627 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 ERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQY 120
            :||.|||:.|||||.:||.|||||||||||..|.|||||||:|:.:||.|.|:||.|:|||.||:
  Rat    36 DRGNWTGKLDFLLSCIGYCVGLGNVWRFPYRAYTNGGGAFLVPYFLMLAICGIPLFFLELSLGQF 100

  Fly   121 AALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTK 185
            ::|||:||: :..|||:|.|..|:|:..:|.:|||:|||:.:||:|||....|||::|...|:|:
  Rat   101 SSLGPLAVW-KISPLFKGAGAAMLLIVGLVAIYYNMIIAYVLFYLFASLTSNLPWEHCGNWWNTE 164

  Fly   186 YCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGL--SKGIE 248
            .|..:               |...:...|...|:::..      .|:|||::.:||.:  |:||.
  Rat   165 RCLEH---------------RGPKDGNGALPLNLSSTV------SPSEEYWSRYVLHIQGSQGIG 208

  Fly   249 ETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILF 313
            ..|.|:.:|..||.|||.|||||:.|||:||||||||||.|||::|::|.|||||||||..||.|
  Rat   209 RPGEIRWNLCLCLLLAWVIVFLCILKGVKSSGKVVYFTATFPYLILLMLLVRGVTLPGAWKGIQF 273

  Fly   314 YLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAG 378
            ||||.:..|.:::||.:||:|||::|...:|||:|.:|||.|..|.|:|:.||...|..||..||
  Rat   274 YLTPQFHHLLSSKVWIEAALQIFYSLGVGFGGLLTFASYNTFHQNIYRDTFIVTLGNAITSILAG 338

  Fly   379 LVIFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFAL 443
            ..|||::|:::.||.|.|::|...|.||||:|||:.:|.||:||.|:.|||.||||||||||||.
  Rat   339 FAIFSVLGYMSQELGVPVDQVAKAGPGLAFVVYPQAMTMLPLSPFWSFLFFFMLLTLGLDSQFAF 403

  Fly   444 METVTTAILDRFP-NLRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAIS 507
            :||:.||:.|.|| .||..|......:.:..|:.||..||:.|||||.|:|.|:|::.::::.|:
  Rat   404 LETIVTAVTDEFPYYLRPKKAVFSGLICVAMYLMGLILTTDGGMYWLVLLDDYSASFGLMVVVIT 468

  Fly   508 ECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYGHYV 572
            .|:.:..:||.|||..||..|:|.:.   ..::...|.:::|||||.:|.::.|:|:|::||.|.
  Rat   469 TCLAVTRVYGIQRFCRDIHMMLGFKP---GLYFRACWLFLSPATLLALLVYSIVKYQPSEYGSYR 530

  Fly   573 YPMWADAVGWIVGLLPVLVI---FLVAFQEIWRAPMSLSFRDRIKHLLQPTAEWGPA------GR 628
            :|.||:.:|.::|||..|:|   .|||   :.|...||  .:|::...:|..:|||:      |.
  Rat   531 FPAWAELLGILMGLLSCLMIPAGMLVA---VLREEGSL--WERLQQASRPAIDWGPSLEENRTGM 590

  Fly   629 PCVNLHAER------YQSQNYDGVT---NTKILIEEEASPKQ 661
            ....|...:      ...:.|.|:|   ||.|.::.|.:.::
  Rat   591 YVATLAGSQSPKPLMVHMRKYGGITSFENTAIEVDREIAEEE 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 259/551 (47%)
Slc6a7NP_446448.2 SLC5-6-like_sbd 37..581 CDD:382020 265/573 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100873
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.720

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