DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GlyT and Slc6a9

DIOPT Version :10

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_006238687.1 Gene:Slc6a9 / 116509 RGDID:621243 Length:638 Species:Rattus norvegicus


Alignment Length:598 Identity:288/598 - (48%)
Similarity:400/598 - (66%) Gaps:33/598 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 TGPGAGGAGESEH-------ERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFT 100
            :.|...||..||.       .||.|..:.:|:|:.:||:||||||||||||||.||||||:.|:.
  Rat    11 SSPEQNGAVPSEATKKDQNLTRGNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRNGGGAFMFPYF 75

  Fly   101 IMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYM 165
            ||||..|:||.||||||||:|:.|.:.|: |..|:|:|:|.||::||..:.:|||::|....:|.
  Rat    76 IMLVFCGIPLFFMELSFGQFASQGCLGVW-RISPMFKGVGYGMMVVSTYIGIYYNVVICIAFYYF 139

  Fly   166 FASFAPVLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKR- 229
            |:|...||||..|...|:|..|...  .|....|||        :..:|...|::.|....|:| 
  Rat   140 FSSMTHVLPWAYCNNPWNTPDCAGV--LDASNLTNG--------SRPTALSGNLSHLFNYTLQRT 194

  Fly   230 PPAEEYFNNFVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVL 294
            .|:|||:..:||.||..|.:.|.::|.|..||.::|.:|||||.:||:||||||||||.||||||
  Rat   195 SPSEEYWRLYVLKLSDDIGDFGEVRLPLLGCLGVSWVVVFLCLIRGVKSSGKVVYFTATFPYVVL 259

  Fly   295 VILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNC 359
            .|||||||||.||.|||::||||.|.::..|:||||||.|||::|..|||||||::|||||.|||
  Rat   260 TILFVRGVTLEGAFTGIMYYLTPKWDKILEAKVWGDAASQIFYSLGCAWGGLITMASYNKFHNNC 324

  Fly   360 YKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVW 424
            |:||:|::..|.|||.:||.|||||:||:|:.|.|||.:|.|.|.||||:.|||.:|.||:||:|
  Rat   325 YRDSVIISITNCATSVYAGFVIFSILGFMANHLGVDVSRVADHGPGLAFVAYPEALTLLPISPLW 389

  Fly   425 AVLFFVMLLTLGLDSQFALMETVTTAILDRFPN--LRQYKIWVVLSVAIFGYIGGLGFTTNSGMY 487
            ::|||.||:.|||.:||.|:||:.|||:|...|  :.|.|.:|.|.||:.|::.|:..|:.:|:|
  Rat   390 SLLFFFMLILLGLGTQFCLLETLVTAIVDEVGNEWILQKKTYVTLGVAVAGFLLGIPLTSQAGIY 454

  Fly   488 WLQLMDKYAANWSVLLIAISECILIAWIYGSQRFLNDIQGMIGKRSWFWNF----FWGIMWRYIT 548
            ||.|||.|||::|:::|:...|:.|.:|||.:.:..|||.|:|       |    |:.|.||:::
  Rat   455 WLLLMDNYAASFSLVVISCIMCVSIMYIYGHRNYFQDIQMMLG-------FPPPLFFQICWRFVS 512

  Fly   549 PATLLFILFFNWVEYKPAKYGHYVYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRI 613
            |..:.|||.|..::|:|..|.||.||.||.|:|:::.|..|:.|.|.|..::.|.... :...|:
  Rat   513 PTIIFFILIFTVIQYRPITYNHYQYPGWAVAIGFLMALSSVICIPLYALFQLCRTDGD-TLLQRL 576

  Fly   614 KHLLQPTAEWGPA 626
            |:..:|:.:||||
  Rat   577 KNATKPSRDWGPA 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..597 CDD:395155 274/546 (50%)
Herpes_BLLF1 <884..1135 CDD:282904
Slc6a9XP_006238687.1 SLC6sbd_GlyT1 16..599 CDD:212067 287/593 (48%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.