DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and Slc6a20

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_579830.1 Gene:Slc6a20 / 113918 RGDID:621651 Length:616 Species:Rattus norvegicus


Alignment Length:643 Identity:219/643 - (34%)
Similarity:324/643 - (50%) Gaps:122/643 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 GPGAGGAGESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGL 108
            ||....|.:.|..|..|.....|:.:.:.|:|||||||||||||...|||:||:|:.|||::.|:
  Rat    16 GPDEKRARDMEKARPQWGNPLQFVFACISYAVGLGNVWRFPYLCQMYGGGSFLVPYLIMLIVEGM 80

  Fly   109 PLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVL 173
            ||:::||:.||....|.:..:|...|...|:|...::||..:.:|||:|.||..:|:|.||...|
  Rat    81 PLLYLELAVGQRMRQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWGFWYLFHSFQDPL 145

  Fly   174 PWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNN 238
            ||..| |..|.:..:.    ::||..:.|.|                              ::..
  Rat   146 PWSVC-PLNSNRTGYD----EECEKASSTQY------------------------------FWYR 175

  Fly   239 FVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVT 303
            ..|.:|..|:|.|.::...|.||.|||.:|:||:.:|.:|:|||||||||.||.||:|..|||:|
  Rat   176 KTLNISPSIQENGGVQWEPALCLTLAWLMVYLCILRGTESTGKVVYFTALMPYCVLIIYLVRGLT 240

  Fly   304 LPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAF 368
            |.||:.|:::..||..:||||.:.|.:||.||||:|...:|.||..:|||:.||:|.|.::||:.
  Rat   241 LHGATNGLMYMFTPKIEQLANPKAWINAATQIFFSLGLGFGSLIAFASYNEPSNDCQKHAVIVSV 305

  Fly   369 CNIATSFFAGLVIFSIIGFLA-------------------------------------------- 389
            .|.:||.||.:|.|||.||.|                                            
  Rat   306 INSSTSIFASIVTFSIYGFKATFNYENCLNKVILLLTNSFDLEDGFLTASNLEEVKDYLASTYPN 370

  Fly   390 -------HELNVDVEKVVD---QGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALM 444
                   |..|..:|..::   ||.|||||||.|.:..:.||.:|:||:|.|||.||:.|.....
  Rat   371 KYSEVFPHIRNCSLESELNTAVQGTGLAFIVYAEAIKNMEVSQLWSVLYFFMLLMLGMGSMLGNT 435

  Fly   445 ETVTTAILDRFPNLRQYKIWVVLS--VAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAIS 507
            ..:.|.:.|. ..:..|.....:|  |.:.....|:.||..:|.||..:.:.|||..|:|||.:.
  Rat   436 AAILTPLTDS-KVISSYLPKEAISGLVCLINCAVGMVFTMEAGNYWFDIFNDYAATLSLLLIVLV 499

  Fly   508 ECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATL--LFILFFN------WVEYK 564
            |.|.:.::||.:||.:|::.|.|:.   .|::|..||.:::|..:  |||.:.:      .::|:
  Rat   500 ETIAVCYVYGLRRFESDLRAMTGRP---LNWYWKAMWAFVSPLLIIGLFIFYLSDYILTGTLQYQ 561

  Fly   565 --PAKYGHYV---YPMWADAVGWIVGLL---PVLVIFLVAFQEIWRAPMSLSFRDRIK 614
              .|..|..|   ||..|.||   :|||   ..:.|.|||        :....|:|:|
  Rat   562 AWDATQGQLVTKDYPPHALAV---IGLLVASSTMCIPLVA--------LGTFIRNRLK 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 212/617 (34%)
Slc6a20NP_579830.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 3/9 (33%)
SLC5-6-like_sbd 26..601 CDD:294310 213/624 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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