DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and Slc6a20a

DIOPT Version :10

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_579830.2 Gene:Slc6a20a / 113918 RGDID:621651 Length:616 Species:Rattus norvegicus


Alignment Length:643 Identity:219/643 - (34%)
Similarity:324/643 - (50%) Gaps:122/643 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 GPGAGGAGESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGL 108
            ||....|.:.|..|..|.....|:.:.:.|:|||||||||||||...|||:||:|:.|||::.|:
  Rat    16 GPDEKRARDMEKARPQWGNPLQFVFACISYAVGLGNVWRFPYLCQMYGGGSFLVPYLIMLIVEGM 80

  Fly   109 PLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVL 173
            ||:::||:.||....|.:..:|...|...|:|...::||..:.:|||:|.||..:|:|.||...|
  Rat    81 PLLYLELAVGQRMRQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWGFWYLFHSFQDPL 145

  Fly   174 PWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNN 238
            ||..| |..|.:..:.    ::||..:.|.|                              ::..
  Rat   146 PWSVC-PLNSNRTGYD----EECEKASSTQY------------------------------FWYR 175

  Fly   239 FVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVT 303
            ..|.:|..|:|.|.::...|.||.|||.:|:||:.:|.:|:|||||||||.||.||:|..|||:|
  Rat   176 KTLNISPSIQENGGVQWEPALCLTLAWLMVYLCILRGTESTGKVVYFTALMPYCVLIIYLVRGLT 240

  Fly   304 LPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAF 368
            |.||:.|:::..||..:||||.:.|.:||.||||:|...:|.||..:|||:.||:|.|.::||:.
  Rat   241 LHGATNGLMYMFTPKMEQLANPKAWINAATQIFFSLGLGFGSLIAFASYNEPSNDCQKHAVIVSV 305

  Fly   369 CNIATSFFAGLVIFSIIGFLA-------------------------------------------- 389
            .|.:||.||.:|.|||.||.|                                            
  Rat   306 INSSTSIFASIVTFSIYGFKATFNYENCLNKVILLLTNSFDLEDGFLTASNLEEVKDYLASTYPN 370

  Fly   390 -------HELNVDVEKVVD---QGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALM 444
                   |..|..:|..::   ||.|||||||.|.:..:.||.:|:||:|.|||.||:.|.....
  Rat   371 KYSEVFPHIRNCSLESELNTAVQGTGLAFIVYTEAIKNMEVSQLWSVLYFFMLLMLGMGSMLGNT 435

  Fly   445 ETVTTAILDRFPNLRQYKIWVVLS--VAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAIS 507
            ..:.|.:.|. ..:..|.....:|  |.:.....|:.||..:|.||..:.:.|||..|:|||.:.
  Rat   436 AAILTPLTDS-KVISSYLPKEAISGLVCLINCAVGMVFTMEAGNYWFDIFNDYAATLSLLLIVLV 499

  Fly   508 ECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATL--LFILFFN------WVEYK 564
            |.|.:.::||.:||.:|::.|.|:.   .|::|..||.:::|..:  |||.:.:      .::|:
  Rat   500 ETIAVCYVYGLRRFESDLRAMTGRP---LNWYWKAMWAFVSPLLIIGLFIFYLSDYILTGTLQYQ 561

  Fly   565 --PAKYGHYV---YPMWADAVGWIVGLL---PVLVIFLVAFQEIWRAPMSLSFRDRIK 614
              .|..|..|   ||..|.||   :|||   ..:.|.|||        :....|:|:|
  Rat   562 AWDATQGQLVTKDYPPHALAV---IGLLVASSTMCIPLVA--------LGTFIRNRLK 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..597 CDD:395155 211/611 (35%)
Herpes_BLLF1 <884..1135 CDD:282904
Slc6a20aNP_579830.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 3/9 (33%)
SLC5-6-like_sbd 26..601 CDD:444915 213/624 (34%)
Blue background indicates that the domain is not in the aligned region.

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