DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and Slc6a5

DIOPT Version :10

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_006540608.1 Gene:Slc6a5 / 104245 MGIID:105090 Length:831 Species:Mus musculus


Alignment Length:689 Identity:309/689 - (44%)
Similarity:429/689 - (62%) Gaps:66/689 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GQSSK----SGSAGVG-----------------GVGGGGGVV----CPSTAISGCASGTALIQLD 41
            |.|::    ||.||.|                 .|..|.|.:    .|:......:..|.::..|
Mouse   134 GHSAQANPPSGPAGAGNALHCKIPALRGPEEDANVSVGKGTLEHNNTPAVGWVNMSQSTVVLGTD 198

  Fly    42 ATG---PGAGGA--------GESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAF 95
            ...   ||:...        |:....||.|:.:.||:||::||:||||||||||||.:.||||||
Mouse   199 GIASVLPGSVATTTIPEDEQGDENKARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAF 263

  Fly    96 LIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAW 160
            |||:.:||.:||||:.|:|:|.||:|:.|||:|::.. |..:|.|..|:::|.::.:|||:||.:
Mouse   264 LIPYLMMLALAGLPIFFLEVSLGQFASQGPVSVWKAI-PALQGCGIAMLIISVLIAIYYNVIICY 327

  Fly   161 TIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQ--ADQC--------EATNGTYYLRTCHNATS-- 213
            |:||:||||..||||.:|...|:|..|....:  .|.|        :..|.|:.:....|.|.  
Mouse   328 TLFYLFASFVSVLPWGSCNNPWNTPECKDKTKLLLDSCVIGDHPKIQIKNSTFCMTAYPNLTMVN 392

  Fly   214 -AAENNITTLALGALKRPPAEEYFNNFVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQ 277
             .::.|.|.::       .:||||..|||.:|.|||..|.|:..||.||||||.||:..|.||::
Mouse   393 FTSQTNKTFVS-------GSEEYFKYFVLKISAGIEYPGEIRWPLAFCLFLAWVIVYASLAKGIK 450

  Fly   278 SSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPA 342
            ||||||||||.|||||||||.:||||||||..||.:::||.|::|.:|.||.|||.||||:||.|
Mouse   451 SSGKVVYFTATFPYVVLVILLIRGVTLPGAGAGIWYFITPKWEKLTDATVWKDAATQIFFSLSAA 515

  Fly   343 WGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVVDQGAGLA 407
            |||||||||||||.||||:|:|||...|.|||.|||.||||:|||:|:|..|::|.|.|||.|:|
Mouse   516 WGGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGFMANERKVNIENVADQGPGIA 580

  Fly   408 FIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDRFPN-LRQYKIWVVLSVAI 471
            |:||||.:||||:||.||::||:||||||||:.||.:||:.|:|.|.||. ||.:|....|...|
Mouse   581 FVVYPEALTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSISDEFPKYLRTHKPVFTLGCCI 645

  Fly   472 FGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIYGSQRFLNDIQGMIGKRSWFW 536
            ..:|.|....|..|:|..||:|.|||::::::|||.|.:.|:::||.|||..||:.|||.:.   
Mouse   646 CFFIMGFPMITQGGIYMFQLVDTYAASYALVIIAIFELVGISYVYGLQRFCEDIEMMIGFKP--- 707

  Fly   537 NFFWGIMWRYITPATLLFILFFNWVEYKPAKYGHYVYPMWADAVGWIVGLLPVLVIFLVAFQEIW 601
            |.||.:.|.::||..|.|||.|::.:::|..||.|.||.|:..:||::....|:.|.::...:::
Mouse   708 NIFWKVCWAFVTPTILTFILCFSFYQWEPMTYGSYRYPNWSMVLGWLMLACSVIWIPIMFVIKMY 772

  Fly   602 RAPMSLSFRDRIKHLLQPTAEWGPAGRPCVNLHAERYQS 640
            .||.  .|.:|:|.:..|..:|||.   ......|||::
Mouse   773 LAPG--RFIERLKLVCSPQPDWGPF---LAQHRGERYKN 806

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..597 CDD:395155 281/553 (51%)
Herpes_BLLF1 <884..1135 CDD:282904
Slc6a5XP_006540608.1 SLC6sbd_GlyT2 225..821 CDD:271389 293/598 (49%)
Blue background indicates that the domain is not in the aligned region.

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