DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GlyT and Slc6a8

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_598748.1 Gene:Slc6a8 / 102857 MGIID:2147834 Length:640 Species:Mus musculus


Alignment Length:680 Identity:279/680 - (41%)
Similarity:390/680 - (57%) Gaps:72/680 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SSKSGSAGVGGVGG----GGGVVCPSTAISGCASGTALIQLDATGPGAGGAGESEHERGTWTGRF 64
            :.||...|:..|.|    |..:|...........|.|       |.||.|...:...|.|||.:.
Mouse     2 AKKSAENGIYSVSGDEKKGPLIVSGPDGAPAKGDGPA-------GLGAPGGRLAVPPRETWTRQM 59

  Fly    65 DFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVY 129
            ||::|.:|::||||||||||||||.||||.||||:.::.::.|:|:.|:|:|.||:...|.:.|:
Mouse    60 DFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYVLIALVGGIPIFFLEISLGQFMKAGSINVW 124

  Fly   130 RRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQAD 194
             ..||||:|||...:::......||.:::||..:|:..||...|||..|...|:|..|....:.:
Mouse   125 -NICPLFKGLGYASMVIVFYCNTYYIMVLAWGFYYLVKSFTTTLPWATCGHTWNTPDCVEIFRHE 188

  Fly   195 QCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGLSKGIEETGSIKLSLAA 259
            .|.            ||:.|   |:|...| |.:|.|..|::.|.||.||.|:|..|::...:..
Mouse   189 DCA------------NASLA---NLTCDQL-ADRRSPVIEFWENKVLRLSTGLEVPGALNWEVTL 237

  Fly   260 CLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLAN 324
            ||...|.:|:.|:.|||:|:||:|||||.|||||||:|.||||.||||..||::||.|||.:|.:
Mouse   238 CLLACWVLVYFCVWKGVKSTGKIVYFTATFPYVVLVVLLVRGVLLPGALDGIIYYLKPDWSKLGS 302

  Fly   325 AQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLA 389
            .|||.||..||||:.:...|.|..|.|||:|:||||||::|:|..|..||||||.|:|||:||:|
Mouse   303 PQVWIDAGTQIFFSYAIGLGALTALGSYNRFNNNCYKDAIILALINSGTSFFAGFVVFSILGFMA 367

  Fly   390 HELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDR 454
            .|..|.:.||.:.|.|||||.||..||.:||:|:||.|||.|||.|||||||..:|...|.:||.
Mouse   368 TEQGVHISKVAESGPGLAFIAYPRAVTLMPVAPLWAALFFFMLLLLGLDSQFVGVEGFITGLLDL 432

  Fly   455 FPNLRQYKIWVVLSVAI---FGYIGGLGFTTN-----SGMYWLQLMDKYAANWSVLL-IAISECI 510
            .|....::....:|||:   ..::..|...|:     .|||..||.|.|:|:.:.|| .|..||:
Mouse   433 LPASYYFRFQREISVALCCALCFVIDLSMVTDVSGGKGGMYVFQLFDYYSASGTTLLWQAFWECV 497

  Fly   511 LIAWIYGSQRFLNDIQGMIGKR-----SWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYGH 570
            ::||:||:.||::||..|||.|     .|.|:||        ||...:.|..||.|.|:|..|.:
Mouse   498 VVAWVYGADRFMDDIACMIGYRPCPWMKWCWSFF--------TPLVCMGIFIFNIVYYEPLVYNN 554

  Fly   571 -YVYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRIKHLLQPTAEWGPAGRPCVNLH 634
             ||||.|.:|:||...|..:|.:.|.....:.||..:::  :|.:||.||.  ||        ||
Mouse   555 TYVYPWWGEAMGWAFALSSMLCVPLHLLGCLLRAKGTMA--ERWQHLTQPI--WG--------LH 607

  Fly   635 AERYQSQNYD--GVT-------NTKILIEE 655
            ...|::|:.|  |:|       ::|:::.|
Mouse   608 HLEYRAQDADVRGLTTLTPVSESSKVVVVE 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 248/560 (44%)
Slc6a8NP_598748.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 7/24 (29%)
SLC6sbd_CT1 52..626 CDD:271397 264/610 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 1 1.000 - - FOG0000575
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.