DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and Slc6a20a

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_631881.1 Gene:Slc6a20a / 102680 MGIID:2143217 Length:592 Species:Mus musculus


Alignment Length:635 Identity:222/635 - (34%)
Similarity:319/635 - (50%) Gaps:126/635 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 EHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFG 118
            |..|..|.....|:.:.:.|:|||||||||||||...|||:||:|:.|||::.|:||:::||:.|
Mouse     2 EKARPQWGHPLQFVFACISYAVGLGNVWRFPYLCQMYGGGSFLVPYIIMLIVEGMPLLYLELAVG 66

  Fly   119 QYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWS 183
            |....|.:..:|...|...|:|...::||..:.:|||:|.||..:|:|.||...|||..| |..|
Mouse    67 QRMRQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWGFWYLFHSFQDPLPWSVC-PLNS 130

  Fly   184 TKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYF-NNFVLGLSKGI 247
                            |.|.|...|..|:|.                   :|| ....|.:|..|
Mouse   131 ----------------NHTGYDEECEKASST-------------------QYFWYRKTLNISPSI 160

  Fly   248 EETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGIL 312
            :|.|.::...|.||.|||.:|:||:.:|.:|:||||||||..||.||:|..|||:||.||:.|::
Mouse   161 QENGGVQWEPALCLTLAWLMVYLCILRGTESTGKVVYFTASMPYCVLIIYLVRGLTLHGATNGLM 225

  Fly   313 FYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFA 377
            :..||..:||||.:.|.:||.||||:|...:|.||..:|||:.||||.|.::||:..|.:||.||
Mouse   226 YMFTPKMEQLANPKAWINAATQIFFSLGLGFGSLIAFASYNEPSNNCQKHAIIVSIINSSTSIFA 290

  Fly   378 GLVIFSIIGFLA---------------------------------------------------HE 391
            .:|.|||.||.|                                                   |.
Mouse   291 SIVTFSIYGFKATFNYENCLNKVILLLTNSFDLEDGFLTVSNLEEVKNYLASTYPNKYSEVFPHI 355

  Fly   392 LNVDVEKVVD---QGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILD 453
            .|..:|..:|   ||.|||||||.|.:..:.||.:|:||:|.|||.||:.|.......:.|.:.|
Mouse   356 RNCSLESELDTAVQGTGLAFIVYTEAIKNMEVSQLWSVLYFFMLLMLGIGSMLGNTAAILTPLTD 420

  Fly   454 RFPNLRQYKIWVVLS--VAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIY 516
            . ..:..|.....:|  |.:.....|:.||..:|.||..:.:.|||..|:|||.:.|.|.:.::|
Mouse   421 S-KVISSYLPKEAISGLVCLINCAVGMVFTMEAGNYWFDIFNDYAATLSLLLIVLVETIAVCYVY 484

  Fly   517 GSQRFLNDIQGMIGKR-SWFWNFFWGIMWRYITPATL--LFILFFN------WVEYK--PAKYGH 570
            |.:||.:|::.|.|:. ||:|.    :||.:::|..:  |||.:.:      .::|:  .|..|.
Mouse   485 GLKRFESDLRAMTGRTLSWYWK----VMWAFVSPLLIVGLFIFYLSDYILTGTLQYQAWDATQGQ 545

  Fly   571 YV---YPMWADAVGWIVGLL---PVLVIFLVAFQEIWRAPMSLSFRDRIK 614
            .|   ||..|.||   :|||   ..:.|.|||        :....|:|:|
Mouse   546 LVTKDYPPHALAV---IGLLVASSTMCIPLVA--------LGTFIRNRLK 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 218/619 (35%)
Slc6a20aNP_631881.1 SLC5-6-like_sbd 2..577 CDD:294310 219/626 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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