DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a16

DIOPT Version :10

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_004916326.1 Gene:slc6a16 / 100497867 XenbaseID:XB-GENE-996340 Length:677 Species:Xenopus tropicalis


Alignment Length:661 Identity:222/661 - (33%)
Similarity:336/661 - (50%) Gaps:154/661 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 AGESE--------HERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIA 106
            ||||:        ..|.||..:..::|:.:|:||||||||||||||:.||||:||:.:.::|:|.
 Frog    13 AGESQLGLLPAESVARPTWGSKVQYILAQVGFSVGLGNVWRFPYLCHQNGGGSFLLLYFLLLLII 77

  Fly   107 GLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAP 171
            |:||.|:||:.||....|.:.|::...|...|:|....:|...|.||||:||.|::||:|.||..
 Frog    78 GIPLFFLELAAGQSIRQGSIGVWKHISPRLAGIGFASCVVCGFVALYYNVIIGWSLFYLFNSFHY 142

  Fly   172 VLPWQNCE--PAWSTKYCFSYAQADQC-EATNGTYY-LRTCHNATSAAENNITTLALGALKRPPA 232
            .|||:||.  |..:       .:..:| :::|.||: .|:..|.|:..|::              
 Frog   143 PLPWENCPTLPNMT-------QEVTECAKSSNTTYFWYRSALNVTNTIESS-------------- 186

  Fly   233 EEYFNNFVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVIL 297
                               .:...:..||.|||.:|...:.||::|||||:||:::||||||...
 Frog   187 -------------------EMNWPMTGCLCLAWFLVCGGMIKGIKSSGKVMYFSSVFPYVVLFCF 232

  Fly   298 FVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKD 362
            .:||:.|.||:.||....||..:...|.|||..||.|:||||...:|.:|..||||...|||:.|
 Frog   233 LIRGLLLEGAADGIRIMFTPKLEIWGNIQVWRQAATQVFFALGLGFGSVIAYSSYNDRQNNCHFD 297

  Fly   363 SLIVAFCNIATSFFAGLVIFSIIGFLAHELN---VD----------------------------- 395
            :::|:|.|..||..|.||:|:::||.|::|.   :|                             
 Frog   298 AILVSFINFMTSILATLVVFAVLGFRANDLTRHCIDTNREKILYLISNGSLYENIVPMKNLTNSE 362

  Fly   396 -----------------------VEKVVD---QGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLT 434
                                   ||.|::   :|.|||||.:.|.:||.|.||.|::|||:|||.
 Frog   363 YSQWYEITNNTLNLQQYGISDCRVEDVMNEGVEGTGLAFIAFTEAMTRFPASPFWSILFFLMLLN 427

  Fly   435 LGLDSQFALMETVTTAILDRFPNLRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANW 499
            |||.:.|..|:.:.|.:||.||.||:.|....:...|.|.:.||.|...||.|::.:.|.|:|..
 Frog   428 LGLSTMFGNMQGIITPLLDNFPYLRKKKTIFTVICCITGLLIGLIFVQRSGSYFVSMFDDYSATL 492

  Fly   500 SVLLIAISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFN----W 560
            .::::.|.|.|.:||:||::||::||.||:|.|.|   ..:..:|:||:...::.:|..:    .
 Frog   493 PLIIVVIFENIAVAWVYGAERFMDDIGGMLGHRPW---RIYKYIWQYISILGMIGLLLASLIRMC 554

  Fly   561 VEY--------KPAKYGHYVYPMWADAVGW-----IVGLLPVLVIFLVAFQEIWRAPMSLSFRDR 612
            :||        :.||.....||.|  |:|.     ||..||:.::||                  
 Frog   555 IEYPRYQAWNQEQAKKEMLEYPPW--ALGMLTSLIIVAALPIPIVFL------------------ 599

  Fly   613 IKHLLQPTAEW 623
             ||::|   :|
 Frog   600 -KHIIQ---DW 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..597 CDD:395155 214/618 (35%)
Herpes_BLLF1 <884..1135 CDD:282904
slc6a16XP_004916326.1 SLC5-6-like_sbd 28..599 CDD:444915 212/615 (34%)
Blue background indicates that the domain is not in the aligned region.

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