DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a6

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_017949178.2 Gene:slc6a6 / 100494063 XenbaseID:XB-GENE-991256 Length:616 Species:Xenopus tropicalis


Alignment Length:602 Identity:252/602 - (41%)
Similarity:362/602 - (60%) Gaps:40/602 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 PGAGGAGESE---HERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIA 106
            ||.....|::   .:|..|..:.||:||:.|..:|||||||||||||.|||||||||:.|.|...
 Frog    26 PGTRPEDEADGKPPQREKWASKIDFVLSVAGGFIGLGNVWRFPYLCYKNGGGAFLIPYFIFLFGG 90

  Fly   107 GLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAP 171
            |||:.|:|:..||:.:.|.:..:.:.||:|.|:|...|::.:::.:||.:|:||.::|:|.||..
 Frog    91 GLPVFFLEVVLGQFTSEGGITCWEKICPVFTGIGYASIVIVSLLNVYYIVILAWGVYYLFQSFQG 155

  Fly   172 VLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYF 236
            .|||..|...|:|:.|     .:.....|.|.::       |....|.|:         |..|::
 Frog   156 QLPWALCHQPWNTESC-----VEDTFRKNWTMWM-------SMNSTNFTS---------PVTEFW 199

  Fly   237 NNFVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRG 301
            .:.||.|||||::.|.:|..||.||.|.|.|.|.|:.|||:|:||||||||.||:::|::|.:||
 Frog   200 EHKVLSLSKGIDDVGVLKWDLALCLLLTWVICFFCIWKGVRSTGKVVYFTATFPFIMLLVLLIRG 264

  Fly   302 VTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIV 366
            ||||||:.||.|||.||..:||:.|||.||..||||:.:...|.:.:|.||||:..|||:|.:::
 Frog   265 VTLPGAAEGIKFYLYPDITRLADPQVWIDAGTQIFFSYAICLGAMTSLGSYNKYKYNCYRDCMLL 329

  Fly   367 AFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVM 431
            ...|..|||.:|..|||::||:|.|..||:..|.:.|.|||||.||:.|:.:|:...||:|||:|
 Frog   330 GCLNSGTSFVSGFAIFSVLGFMAQEQGVDIADVAESGPGLAFIAYPKAVSMMPLPSFWAILFFIM 394

  Fly   432 LLTLGLDSQFALMETVTTAILDRFPN-LRQ-YKIWVVLSVAIF-GYIGGLGFTTNSGMYWLQLMD 493
            ||.|||||||..:|...|:::|.:|: ||: |:..:.::|..| .|:.||...|..|||..||.|
 Frog   395 LLLLGLDSQFVEVEGQITSLVDLYPSFLRKGYRREIFIAVVCFLSYLLGLTMVTEGGMYVFQLFD 459

  Fly   494 KYAANWSVLL-IAISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILF 557
            .|||:...|| :|..||:.:||:||:.:|.::|:.|||.:...| ..|.  |..|||...:....
 Frog   460 YYAASGVCLLWVAFFECVAVAWVYGADKFYDNIEDMIGYKPGPW-MKWS--WTVITPLLCVACFI 521

  Fly   558 FNWVEYKPAKYG-HYVYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRIKHLLQPT- 620
            |:..:|.|..|. :||||.||..:||::.|..::.|.||....|.|:..||.  :|||.:..|. 
 Frog   522 FSLAKYTPLTYNKYYVYPDWAIGLGWVLALSSMICIPLVVVFHIVRSDGSLI--ERIKAVTAPRE 584

  Fly   621 ----AEWGPAGRP-CVN 632
                |:...|..| |.|
 Frog   585 VNRWAKDSEAAAPICTN 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 237/550 (43%)
slc6a6XP_017949178.2 SLC6sbd_TauT 41..582 CDD:271398 243/566 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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