DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a9

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_004914027.1 Gene:slc6a9 / 100492204 XenbaseID:XB-GENE-948182 Length:638 Species:Xenopus tropicalis


Alignment Length:647 Identity:289/647 - (44%)
Similarity:421/647 - (65%) Gaps:43/647 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 CASGTALIQLDATGPGAGGAGESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAF 95
            |..|.    |:...||.....:...:||.|..:.:|:|:.:||:||||||||||||||.||||||
 Frog     5 CGEGI----LNGAVPGEATKKDENPKRGNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRNGGGAF 65

  Fly    96 LIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAW 160
            :.|:.||||..|:||.||||||||:|:.|.:.|: |..|:|:|:|.||::||..:.:|||::|..
 Frog    66 MFPYFIMLVFCGIPLFFMELSFGQFASQGCLGVW-RVSPIFKGVGYGMMVVSTYIGIYYNVVICI 129

  Fly   161 TIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALG 225
            ..:|.|||...:|||..|...|:|:.|......:    ::.|:.:        ::::::..|.:|
 Frog   130 AFYYFFASMNRILPWTYCNNLWNTENCAGVLSPN----SSATFNI--------SSQHSLLNLTMG 182

  Fly   226 ---ALKR-PPAEEYFNNFVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFT 286
               .||| .|:|||:...||.:|..|.:.|.::|.|..||.::|.:|||||.:||:|||||||||
 Frog   183 LNQTLKRTSPSEEYWRRHVLNISGDIGDFGEVRLPLLGCLGVSWLVVFLCLIRGVKSSGKVVYFT 247

  Fly   287 ALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSS 351
            |.||||||.|||:||:||.||..|||:||||.|.::.:|:||||||.|||::|..|||||||::|
 Frog   248 ATFPYVVLTILFIRGITLDGAINGILYYLTPQWDKILHAKVWGDAASQIFYSLGCAWGGLITMAS 312

  Fly   352 YNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVT 416
            ||||.||||:||:|::..|.|||.:||.|||||:||:|..|.|||.:|.|.|.||||:.|||.:|
 Frog   313 YNKFHNNCYRDSIIISITNCATSVYAGFVIFSILGFMATHLGVDVSEVADHGPGLAFVAYPEALT 377

  Fly   417 RLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDRFPN--LRQYKIWVVLSVAIFGYIGGLG 479
            .||:||:|::|||.||:.|||.:||.|:||:.|||:|...:  :.::|..|.|.|||.|::.|:.
 Frog   378 LLPISPLWSILFFFMLILLGLGTQFCLLETLVTAIVDEIGSDWIIRWKTLVTLGVAIIGFLLGIP 442

  Fly   480 FTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIYGSQRFLNDIQGMIGKRSWFWNF----FW 540
            .||.:|:|||.|||.|||::|:::|:...||.:.:|||.:.:..||:.|:|       |    |:
 Frog   443 LTTQAGIYWLLLMDNYAASFSLVIISCIMCIAVMYIYGHRNYFKDIEMMLG-------FPPPLFF 500

  Fly   541 GIMWRYITPATLLFILFFNWVEYKPAKYGHYVYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPM 605
            ...||:.:||.:.|||.|..::|:|.||..||||.||..:|:::.|..|:.|.|.|...:||:. 
 Frog   501 QFCWRFFSPAIIFFILIFTVIQYRPIKYNDYVYPDWALTIGFLMALSSVICIPLYAVFRVWRSE- 564

  Fly   606 SLSFRDRIKHLLQPTAEWGPAGRPCVNLHAERYQSQNYDGVTNTKILIEEEASPKQAANKKD 667
            ..:|..|:|:.::|:.:||||        ...:::..|..:::::.....||.|......||
 Frog   565 GHTFLQRLKNAVKPSKDWGPA--------LLEHRTGRYAQISSSRCDSNPEAQPLNPEKLKD 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 269/555 (48%)
slc6a9XP_004914027.1 SLC6sbd_GlyT1 11..595 CDD:212067 280/612 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm49529
Panther 1 1.100 - - LDO PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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