DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a12

DIOPT Version :10

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_031754510.1 Gene:slc6a12 / 100492029 XenbaseID:XB-GENE-6033368 Length:612 Species:Xenopus tropicalis


Alignment Length:653 Identity:272/653 - (41%)
Similarity:385/653 - (58%) Gaps:82/653 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 GAGGA------GESEH------ERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIP 98
            ||||:      ||..|      :||.|:.:.:|:||:.|..:|||||||||||||.||||||.||
 Frog    12 GAGGSDTLCALGEGRHREPEIEDRGQWSNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIP 76

  Fly    99 FTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIF 163
            :.|.|...|:|:.|:|.:.|||.:.|.:..:|:.||||.|:|....::...:.:||.:|:||.:|
 Frog    77 YLIFLFTCGIPVFFLETALGQYTSQGGITAWRKICPLFEGIGYASQVIEGYLNIYYIVILAWALF 141

  Fly   164 YMFASFAPVLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALK 228
            |:|:||...|||..|...|:|::|..:....:              |.|| .||:.:::.     
 Frog   142 YLFSSFTAELPWATCNNTWNTEHCIDFVGKSE--------------NFTS-LENSTSSVV----- 186

  Fly   229 RPPAEEYFNNFVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVV 293
                 |::...||.||:|||..|:::..||.||.|||.|.:.|:.|||:|:||||||||.||||:
 Frog   187 -----EFWERRVLHLSEGIEHLGNVRWDLALCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYVM 246

  Fly   294 LVILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNN 358
            |:||.|||||||||..||:|||.||..:|.:.|||.||..||||:.:...|.|..|.||||::||
 Frog   247 LIILLVRGVTLPGAYEGIIFYLKPDMTRLQDPQVWMDAGTQIFFSYAICQGCLTALGSYNKYNNN 311

  Fly   359 CYKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPV 423
            ||:|.:.:.|.|..|||.||..|||::||:|.|..|.:.:|.:.|.|||||.||:.||.:||||:
 Frog   312 CYRDCIALCFLNSITSFVAGFAIFSVLGFMAQEQGVPISEVAESGPGLAFIAYPKAVTMMPVSPL 376

  Fly   424 WAVLFFVMLLTLGLDSQFALMETVTTAILDRFPNLRQYKI---WVVLSVAIFGYIGGLGFTTNSG 485
            |:.|||:||:.|||||||..:|::.|||:|.||::.:.|.   :.:|:||:..|:.||...|..|
 Frog   377 WSCLFFLMLIFLGLDSQFVCVESLVTAIVDMFPHVFRKKYRREFFILAVAVICYLLGLILLTEGG 441

  Fly   486 MYWLQLMDKYAANWSVLL-IAISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITP 549
            ||..||.|.|||:.:.|| :||.|.|.:.::||:.||.::|:.|||.|.|....:   .|.:.||
 Frog   442 MYVFQLFDYYAASGTCLLFVAIFEVICVGYVYGANRFYDNIEDMIGYRPWPLVKY---CWLFATP 503

  Fly   550 ATLLFILFFNWVEYKPAKYGH-YVYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRI 613
            |..|....|:.::|.|.||.: ||||.|..|:||::.|..::.|.:.||..|.|.  ..||..|:
 Frog   504 AVCLGTFLFSLIKYSPLKYNNRYVYPSWGYAIGWLMALSSMICIPIYAFYIILRT--KGSFTQRL 566

  Fly   614 KHLLQPTAEWGPAGRPCVNLHAERYQSQNYDGVTNTKILIEEEASPKQ------------AANKK 666
            |.|:.|              |.:..|.:.|         :::.|.|||            ..:||
 Frog   567 KQLVTP--------------HTDLPQPKKY---------LKDRADPKQIEVLGLEAKDGLIVSKK 608

  Fly   667 DRQ 669
            :.|
 Frog   609 ETQ 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..597 CDD:395155 245/544 (45%)
Herpes_BLLF1 <884..1135 CDD:282904
slc6a12XP_031754510.1 SLC5-6-like_sbd 34..572 CDD:444915 254/567 (45%)
Blue background indicates that the domain is not in the aligned region.

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