DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a17

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_002933031.1 Gene:slc6a17 / 100490416 XenbaseID:XB-GENE-964419 Length:725 Species:Xenopus tropicalis


Alignment Length:702 Identity:225/702 - (32%)
Similarity:341/702 - (48%) Gaps:157/702 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 ERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQY 120
            :|..|..:..::|:.:||||||||||||||||..|||||:::|:.|:|:|.|:||.|:||:.||.
 Frog    58 DRPAWNNKLQYILAQIGYSVGLGNVWRFPYLCQKNGGGAYMVPYLILLIIIGIPLFFLELAVGQR 122

  Fly   121 AALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTK 185
            ...|.:.|:...||...|:|....:|...|.||||:||.|:|||.|.||...|||..|....:..
 Frog   123 IRRGSIGVWNYICPRLGGIGYASCVVCFFVGLYYNVIIGWSIFYFFQSFQYPLPWNECPTVKNGS 187

  Fly   186 YCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGLSKGIEET 250
            .....|:.|:..||...:|..                                 .|.:|..|.|.
 Frog   188 VNVVEAECDKSSATTFFWYRE---------------------------------ALDISNSISEG 219

  Fly   251 GSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYL 315
            |.:...:..||.:|||:|.:.:.||:||||||:||::|||||||:...:||:.|.|:..|||..|
 Frog   220 GGLNWKMTLCLLVAWTMVCMAMIKGIQSSGKVMYFSSLFPYVVLICFLIRGLFLRGSVDGILHML 284

  Fly   316 TPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLV 380
            ||..:::.:.|||.:||.|:||||...:||:|..|||||..|||..|:.:|:|.|..||..|.||
 Frog   285 TPKVEKMLDPQVWREAATQVFFALGLGFGGVIAFSSYNKQDNNCQFDAALVSFINFFTSVLATLV 349

  Fly   381 IFSIIGFLAHELN-----VDVEKVVD--------------------------------------- 401
            :|:::||.|:.:|     .:.||::.                                       
 Frog   350 VFAVLGFKANVMNEKCVVQNAEKILGYINTHDIDYSLIPPHVNFSHLTTEDYAKMYQVIKTVKED 414

  Fly   402 --------------------QGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMET 446
                                ||.|||||.:.|.:|..|.||.|:|:||.||:.|||.|....|..
 Frog   415 HFQDLHLDACVLEDELDKAVQGTGLAFIAFTEAMTHFPASPFWSVMFFFMLINLGLGSMIGTMSG 479

  Fly   447 VTTAILDRFPNLRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECIL 511
            :.|.|:|.|   :..|..:.:|..|..::.||.|...||.|::.:.|.|:|...:.::.|.|.|.
 Frog   480 IITPIIDTF---KVRKEILTVSCCIVAFLLGLIFVQRSGNYFVNMFDDYSATLPLTIVVILENIA 541

  Fly   512 IAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVE--YKPAKYGHYV-- 572
            :||:||:::|:.::..|:|.|.:.:.|:   .|:|::|..:..:|..:.::  ..|..|..::  
 Frog   542 VAWVYGTKKFMQELTEMLGFRPYSYYFY---SWKYVSPIFMAILLTASVIQLGISPPGYSAWIRE 603

  Fly   573 --------YPMWADAV---GWIVGLLPVLVIFLV-AFQEIWRAP-----MSLSFR---------- 610
                    ||.||.::   ..|:.:|||.|||:: .||.|   |     :|:|::          
 Frog   604 LAAEQFVLYPTWALSLLITLIILAILPVPVIFILWQFQLI---PDGSNKLSVSYKKGMMKDISNL 665

  Fly   611 ---DRIKHLLQPTAEWGPAGRPCVNLHAERYQSQNYDGVTNTKILIEEEASP 659
               |..:.:|.......|:..|         ..::|.|..|        |||
 Frog   666 EDNDETRFILSKVPSETPSPMP---------THRSYLGPAN--------ASP 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 212/625 (34%)
slc6a17XP_002933031.1 SLC6sbd_NTT4 59..647 CDD:271403 213/629 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 1 1.000 - - FOG0000575
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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