DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a3

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_002933174.1 Gene:slc6a3 / 100488824 XenbaseID:XB-GENE-982873 Length:621 Species:Xenopus tropicalis


Alignment Length:574 Identity:247/574 - (43%)
Similarity:356/574 - (62%) Gaps:36/574 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 ERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQY 120
            ||.||:.:.|||||::|::|.|.||||||||||.|||||||:|:...:||||:||.:|||:.||:
 Frog    59 ERETWSKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYIFFMVIAGMPLFYMELALGQF 123

  Fly   121 AALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTK 185
            ...|...|: :.||:|:|:|..:||:|..|..:||:||||.:.|:|:||...|||.:|..:|::.
 Frog   124 NREGAAGVW-KICPIFKGVGYTVILISLYVGFFYNVIIAWALQYLFSSFTSELPWIHCNNSWNSP 187

  Fly   186 YCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGAL----KRPPAEEYFNNFVLGL--S 244
            .|            :.|.|            :|.:..:|..|    |..||.|||...||.|  |
 Frog   188 NC------------SETKY------------SNFSDYSLFGLNDTYKVTPAAEYFERGVLHLHES 228

  Fly   245 KGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGAST 309
            :||.:.||.:..|.:||.:....::..|.|||::|||||:.||..|||||..|.:||||||||..
 Frog   229 QGIHDLGSPRWKLTSCLIVVIVFLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRGVTLPGAID 293

  Fly   310 GILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATS 374
            ||..||:.|:.:|..|.||.|||.||.|:|...:|.||..||||||:||||:|::|....|..||
 Frog   294 GIKAYLSVDFLRLCEASVWIDAATQICFSLGVGFGVLIAFSSYNKFTNNCYRDAIITTSVNSLTS 358

  Fly   375 FFAGLVIFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDS 439
            ||:|.||||.:|::|.:.||.:..|...|.||.||:|||.:..||:|.||:|:||:||||||:||
 Frog   359 FFSGFVIFSFLGYMAQKHNVPIGDVAKDGPGLIFIIYPEAIATLPLSSVWSVIFFIMLLTLGIDS 423

  Fly   440 QFALMETVTTAILDRFPNLRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLI 504
            ....||:|.|.::|.|..||:::....|.:.:..:...|...||.|:|...|:|.:||..|:|..
 Frog   424 AMGGMESVITGLIDEFKFLRRHRELFTLFIVLCTFFTSLSCVTNGGIYVFTLLDHFAAGTSILFG 488

  Fly   505 AISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYG 569
            .:.|.|.|||.||..||.:||:.|||||.   ..:|.:.|::::|..|||::..:.|.|:..|||
 Frog   489 VLIEAIGIAWFYGVGRFSDDIEEMIGKRP---GLYWRLCWKFVSPCFLLFVVVVSIVTYRSPKYG 550

  Fly   570 HYVYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRIKHLLQPTAEW 623
            :|.:|.||:.:||:|.:..:.::.|.|..:.  :.:..|||::|.:.:.|..|:
 Frog   551 NYTFPEWANVIGWLVAISSMAMVPLYAIYKF--SSLHGSFREKIAYAITPEKEY 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 240/551 (44%)
slc6a3XP_002933174.1 SLC6sbd_DAT1 60..615 CDD:212083 246/573 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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