DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a7

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_002940131.3 Gene:slc6a7 / 100487063 XenbaseID:XB-GENE-479449 Length:634 Species:Xenopus tropicalis


Alignment Length:638 Identity:279/638 - (43%)
Similarity:408/638 - (63%) Gaps:75/638 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 ESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELS 116
            |...:||.|:|:.|||||.:||.|||||||||||..|.|||||||||:.|||.|.|:||.|||||
 Frog    32 EYPEDRGNWSGKLDFLLSCIGYCVGLGNVWRFPYRAYTNGGGAFLIPYFIMLAICGIPLFFMELS 96

  Fly   117 FGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPA 181
            .||:::|||:||: :..|||:|:|.||:|:.|:|.:|||:|||:.:||:|||....|||::|...
 Frog    97 LGQFSSLGPLAVW-KISPLFKGVGMGMLLIVALVAIYYNMIIAYVLFYLFASLTSSLPWEHCGNW 160

  Fly   182 WSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGL--S 244
            |:|..|..:            :.:|..::|.....:|..:         |:|||::.:||.:  |
 Frog   161 WNTDLCLDH------------HVIRASNSALLVNISNTVS---------PSEEYWSRYVLHIQGS 204

  Fly   245 KGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGAST 309
            .||.:.|.::..|..||.|:||||:||:.|||:||||||||||.|||::||:|.:|||||.||..
 Frog   205 SGIGDPGQLRWKLCLCLLLSWTIVYLCILKGVKSSGKVVYFTATFPYIILVMLLIRGVTLEGAWI 269

  Fly   310 GILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATS 374
            ||.|||||.::.|..::||.:||:|||::|...:|||:|.:|||.|..|.|:|:.||...|..||
 Frog   270 GIKFYLTPQFEHLLTSKVWIEAALQIFYSLGVGFGGLLTFASYNTFHQNIYRDTFIVTLGNAFTS 334

  Fly   375 FFAGLVIFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDS 439
            ..||..|||::|:::.||.|.|::|...|.||||:|||:.:|.||:||.|:.|||.|||||||||
 Frog   335 ILAGFAIFSVLGYMSQELGVPVDQVAKAGPGLAFVVYPQAMTMLPLSPFWSFLFFFMLLTLGLDS 399

  Fly   440 QFALMETVTTAILDRFP-NLRQYK--IWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSV 501
            |||.|||:.|||.|.|| .||..|  ...::.||:|  :.||...|:.|||||.|:|.|:|.:.:
 Frog   400 QFAFMETIVTAITDEFPYYLRPKKAVFSAIICVALF--LLGLILATDGGMYWLVLLDDYSAGFGL 462

  Fly   502 LLIAISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVEYKPA 566
            |:|.|:.|:.::.:||.:.|..|||.|:|.:.   ..::...|.:::|.||:.:|.::.::|:|:
 Frog   463 LVIVITFCLSVSRVYGIKNFCRDIQMMLGFKP---GLYFKACWIFLSPVTLMCLLAYSILKYQPS 524

  Fly   567 KYGHYVYPMWADAVGWIVGLLPVLVI---FLVAFQE----IWRAPMSLSFRDRIKHLLQPTAEWG 624
            :||.|.:|:|::|:|.::|||..::|   .|||..:    :|         :||:...:|..:||
 Frog   525 QYGSYKFPLWSEALGILMGLLSCMMIPIGMLVAILKEEGSLW---------ERIRQASRPAMDWG 580

  Fly   625 P--------------AG----RPCVNLHAERYQSQNYDGVT---NTKILIEEE 656
            |              ||    :|.: :|..:     |.|:|   ||.|.:::|
 Frog   581 PSMEENRTGMYVNTLAGSQSPKPLM-VHMRK-----YGGITSYENTAIEVDKE 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 261/557 (47%)
slc6a7XP_002940131.3 SLC5-6-like_sbd 37..581 CDD:382020 265/579 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 562 1.000 Domainoid score I236
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm49529
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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