DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a19a.2

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_002665492.2 Gene:slc6a19a.2 / 100334171 ZFINID:ZDB-GENE-141210-16 Length:647 Species:Danio rerio


Alignment Length:654 Identity:223/654 - (34%)
Similarity:332/654 - (50%) Gaps:128/654 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 ERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQY 120
            ||..|..:..::|:.:|:.|||||||||||||.::|||||:|||.|:||:.|:||:.:|.:.||.
Zfish    32 ERPKWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVLEGIPLLHLEFAIGQR 96

  Fly   121 AALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTK 185
            ...|.|.|:|...|...|:|...:|||.||.:|||.||||.::|.|.||...|||..|       
Zfish    97 LRRGSVGVWRSINPYLLGVGIASMLVSFIVGMYYNTIIAWVMWYFFNSFQDPLPWSQC------- 154

  Fly   186 YCFSYAQADQCEATNG--TYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGLSKGIE 248
                        ..||  |.::..|..::                  |.:.::....|..:..||
Zfish   155 ------------PINGSRTGFVSECERSS------------------PVDYFWYRKTLNTTPHIE 189

  Fly   249 ETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILF 313
            ::|.::..:...|..|||::::|..:|::::||.||.|:..||:||.|..:||:||.|:.:||.|
Zfish   190 DSGGLQWWMVLSLLCAWTVLWVCCIRGIETTGKAVYITSTLPYLVLTIFLIRGLTLKGSVSGIKF 254

  Fly   314 YLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAG 378
            ..|||..:|.:.|.|.||..|:||:.|.|:||||..||||...|||.:|::|::..|..||.:|.
Zfish   255 LFTPDVNELLDPQTWLDAGAQVFFSFSLAFGGLIAFSSYNSVHNNCEQDAVIISIINGMTSIYAA 319

  Fly   379 LVIFSIIGFLAHE-----------------------------------LNV-------------- 394
            :||:|||||.|.|                                   ||:              
Zfish   320 IVIYSIIGFRATERFDDCLNGNILSLLNAFDLPEGSIIEGNYTEAIQQLNISRPDIIQELQLKTC 384

  Fly   395 DVEKVVDQ---GAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAI--LDR 454
            |::..:.|   |.||||||:.|.:|::||||:|:||||:||..|||.:.|..:|.|...:  ||.
Zfish   385 DMQTFLSQGVEGTGLAFIVFTEAITKMPVSPLWSVLFFIMLFCLGLSTMFGSIEGVVVPLQDLDI 449

  Fly   455 FPNLRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIYGSQ 519
            .|.....:.:..| |.:..:...:.|...||.|||.|.|.:|.:..:|:||..|.:.::::||..
Zfish   450 LPKNWPKEAYTAL-VCVVSFAFAIIFAQGSGEYWLALFDGFAVSIPLLIIAFCEMMAVSYVYGID 513

  Fly   520 RFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYGHYV------------ 572
            ||.:||:.|||.:.   |.||...||.|:|..:|.|..|.:|.....|..:..            
Zfish   514 RFNDDIKFMIGHKP---NIFWQATWRLISPLIVLVIFLFYFVTTVSKKLTYIAWDPESENFPTLS 575

  Fly   573 ---YPMWADAVGWIVGLLPVLVIFLVAFQEIWR-------------APMSLSFRDRIKHLLQPTA 621
               ||.|..|:.:|:..:|||||..||...:.|             .|.|:|  ||:: :::.|.
Zfish   576 VLPYPGWISAIIFILAGIPVLVIPTVALVRLIRNRCCKKEETHATETPYSIS--DRVQ-MMEETE 637

  Fly   622 EWGP 625
            :..|
Zfish   638 QNNP 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 215/629 (34%)
slc6a19a.2XP_002665492.2 SLC5-6-like_sbd 33..613 CDD:294310 215/620 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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