DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a13

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_002667408.5 Gene:slc6a13 / 100332592 ZFINID:ZDB-GENE-170607-2 Length:621 Species:Danio rerio


Alignment Length:595 Identity:254/595 - (42%)
Similarity:365/595 - (61%) Gaps:53/595 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 ERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQY 120
            :||.|:.:.:|:||:.|..:|||||||||||||.||||||.||:.|.|...|:|:.|:|:|.|||
Zfish    29 DRGQWSNKLEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYLIFLFTCGIPVFFLEISLGQY 93

  Fly   121 AALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTK 185
            .:.|.:..:|:..|||.|:|....::.|::..||.:::||.|||:..||...|||.:|...|:|:
Zfish    94 TSEGGITCWRKISPLFEGIGYATQVIVALLNFYYIIVLAWGIFYLSNSFTWNLPWSSCNNTWNTE 158

  Fly   186 YCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYFNNFVLGLSKGIEET 250
            .|..:.:.:  ::.:.:|    ..||||                 |..|::...||.:|.|||:.
Zfish   159 SCMEFQRRN--DSVDQSY----LDNATS-----------------PVIEFWERRVLRISSGIEDI 200

  Fly   251 GSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYL 315
            |::...|..||.|||.:.:.|:.|||:|:||||||||.||||:|:||.:|||||||||.||.|||
Zfish   201 GTLHWDLVLCLLLAWVLCYFCIWKGVKSTGKVVYFTATFPYVMLLILLIRGVTLPGASRGIQFYL 265

  Fly   316 TPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLV 380
            .||..:||:.|||.||..||||:.:...|.|..|.||||::||||:|||.:.|.|..|||.||..
Zfish   266 YPDLGRLADPQVWMDAGTQIFFSYAICLGCLTALGSYNKYNNNCYRDSLALCFLNSGTSFVAGFA 330

  Fly   381 IFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALME 445
            ||||:||:::|.||.:.:|.:.|.|||||.||..|:.:|:||:||..||:|::.|||||||..:|
Zfish   331 IFSILGFMSYEQNVPISEVAESGPGLAFIAYPRAVSMMPISPLWACFFFIMIVLLGLDSQFVCVE 395

  Fly   446 TVTTAILDRFPNL---RQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLL-IAI 506
            ::.||::|.:|:.   :..:..::|.|||..::.||...|..|||..||.|.|||:...|| :||
Zfish   396 SLVTAMVDMYPSFFRRKNRRELLILVVAIVSFLVGLIMLTEGGMYVFQLFDYYAASGMCLLFVAI 460

  Fly   507 SECILIAWIYGSQRFLNDIQGMIGKR-----SWFWNFFWGIMWRYITPATLLFILFFNWVEYKPA 566
            .|.:.||||||:.||.::|:.|||.|     .:.|.||        ||||......|:.::|.|.
Zfish   461 FETVCIAWIYGANRFYDNIEDMIGYRPGPYIKYCWLFF--------TPATCFGTFAFSLIKYTPL 517

  Fly   567 KYGH-YVYPMWADAVGWIVGL-----LPVLVIFLVAFQEIWRAPMSLSFRDRIKHLLQPTAEWGP 625
            ||.: ||||.|..|:||::.|     :|:.||:.:       .....|..:|::.|::|:.:...
Zfish   518 KYNNEYVYPWWGYALGWMLALSSMICVPLWVIYRM-------GTTKGSLMERVQFLIRPSPDLPK 575

  Fly   626 AGRPCVNLHA 635
            :.|....|.|
Zfish   576 SRREQEKLQA 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 247/560 (44%)
slc6a13XP_002667408.5 SLC6sbd-TauT-like 30..569 CDD:271387 250/576 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 1 1.000 - - FOG0000575
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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