DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and si:ch211-117c9.5

DIOPT Version :10

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_001922963.4 Gene:si:ch211-117c9.5 / 100150452 ZFINID:ZDB-GENE-110408-2 Length:652 Species:Danio rerio


Alignment Length:628 Identity:263/628 - (41%)
Similarity:369/628 - (58%) Gaps:60/628 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GGGGGVVCPSTAISGCASGTALIQLDATGPGAGGAGESEHERGTWTGRFDFLLSLLGYSVGLGNV 80
            |....|..||.    ||.      |..||......|.|  :|.||:.:.||::|.:|::||||||
Zfish    34 GSNTDVAEPSV----CAG------LVDTGDPTAELGHS--DRQTWSRQMDFIMSCVGFAVGLGNV 86

  Fly    81 WRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMIL 145
            ||||||||.||||.||||:.:|:...|:|:.|:|::.||:...|.||.: ...|||:|||...::
Zfish    87 WRFPYLCYKNGGGVFLIPYILMVFFGGIPVFFLEIALGQFMKQGGVATW-NIAPLFKGLGLASMV 150

  Fly   146 VSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHN 210
            :......||.:::.|.::::..||...|||..|...|:|..|          .||   :.|.|.|
Zfish   151 IVFFCNTYYIMVLVWGLYFLAHSFTSSLPWATCGHEWNTINC----------TTN---FSRVCFN 202

  Fly   211 ATSAAENNIT-TLALGALK----RPPAEEYFNNFVLGLSKGIEETGSIKLSLAACLFLAWTIVFL 270
            .:.:..||.: .::.|.|:    |....|::...||.||.|::|.|.|...:..||...|.||:.
Zfish   203 QSPSHPNNSSLNISAGCLEPTGLRSSVMEFWERKVLRLSGGLDEVGDISGHMVLCLLATWIIVYF 267

  Fly   271 CLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQI 335
            |:.|||:|:||||||||:|||:|||:|||.||:||||..||::||.|:|.:|:.||||.|||.||
Zfish   268 CIWKGVKSAGKVVYFTAVFPYLVLVVLFVHGVSLPGAINGIIYYLKPNWSKLSEAQVWIDAATQI 332

  Fly   336 FFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVV 400
            ||:.:...|.|..|.|||:|:||||:|:.|:|..|..||||||.|:||::||:|.|.:||:..|.
Zfish   333 FFSYAIGLGALTALGSYNRFNNNCYQDAFILALINSGTSFFAGFVVFSVLGFMAAEQDVDISNVA 397

  Fly   401 DQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDRFP------NLR 459
            :.|.|||||.||:.|:.:|::|:||||||:|||.|||||||..:|...|.|:|..|      :||
Zfish   398 ESGPGLAFIAYPKAVSLMPLAPLWAVLFFLMLLVLGLDSQFVGVEGFITGIMDMLPPKSFIGSLR 462

  Fly   460 QYKIWVVLSVAIFG-YIGGLGFTTNSGMYWLQLMDKYAANWSVLL-IAISECILIAWIYGSQRFL 522
            :.   ||:::..|. :...|...|..|||..||.|.|:|:...|| .|..||:::||:||:.||:
Zfish   463 RE---VVVAICCFTCFTIDLSMVTEGGMYVFQLFDYYSASGITLLWQAFWECVVVAWVYGADRFM 524

  Fly   523 NDIQGMIGKR-----SWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYGH-YVYPMWADAVG 581
            :|:..|||.|     .|.|:        ||||...:.:..|:.|.||...|.. ||||.|.:|:|
Zfish   525 DDVACMIGYRPLPYMKWCWS--------YITPVVCMGVFLFHVVNYKRLVYNAVYVYPWWGEALG 581

  Fly   582 WIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRIKHLLQPTAEWG 624
            |.:.|..:|.|.|....::.....||  .:|.:||..|.  ||
Zfish   582 WFLALSSMLCIPLTVLYKLLHCKGSL--MERWQHLTTPI--WG 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..597 CDD:395155 244/558 (44%)
Herpes_BLLF1 <884..1135 CDD:282904
si:ch211-117c9.5XP_001922963.4 SLC5-6-like_sbd 63..652 CDD:444915 252/587 (43%)
Blue background indicates that the domain is not in the aligned region.

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