DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a8l

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_012815966.1 Gene:slc6a8l / 100127575 XenbaseID:XB-GENE-5768780 Length:654 Species:Xenopus tropicalis


Alignment Length:639 Identity:269/639 - (42%)
Similarity:368/639 - (57%) Gaps:51/639 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SSKSGSAGVGGVGG----GGGVVCPSTAISGCASGTALIQLDATGPGAGGAGESEHERGTWTGRF 64
            :.|.|.:|...:.|    |||...|..        .|:| .....|..|.......||.|||.:.
 Frog    13 TEKPGCSGAPDMEGAETVGGGEAVPDE--------KAVI-APLVVPSMGQVKIPIPERETWTRQM 68

  Fly    65 DFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVY 129
            ||::|.:|::||||||||||||||.||||.||||:.:::.:.|:|:.|:|::.||:...|.:|.:
 Frog    69 DFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYLLIVFVGGIPVFFLEIALGQFMKQGGIAAW 133

  Fly   130 RRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQAD 194
             ...|||:|||...:::......||.:|:.|.::|:..||...|||..|...|::|.|......|
 Frog   134 -NIAPLFKGLGFASMVIVFFCNTYYIMILVWGLYYLVHSFTNTLPWATCGNPWNSKECTEVFLVD 197

  Fly   195 QCEATNGTYYLRTCHNATSAAENNITTLALGAL--KRPPAEEYFNNFVLGLSKGIEETGSIKLSL 257
            .|  .||     :..|.|.:  ..:..::..||  ||.|..|::...||.:|.|:.|.|.:...:
 Frog   198 HC--NNG-----SLANVTDS--GTLVNISCDALVNKRSPVIEFWERKVLQISGGLNEPGQLNWQM 253

  Fly   258 AACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQL 322
            ..||...|.||:.|:.|||:|:|||||||||||||||::|...|||||||..||::||.|:|.:|
 Frog   254 ILCLMATWVIVYFCIWKGVKSTGKVVYFTALFPYVVLIVLLAHGVTLPGALDGIVYYLKPNWSKL 318

  Fly   323 ANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGF 387
            |.||||.||..||||:.:...|.|..|.|||:|.||||:|:.|:|..|..||||||.|:||::||
 Frog   319 AEAQVWIDAGTQIFFSYAIGLGALTALGSYNRFHNNCYRDAYILAAINSTTSFFAGFVVFSVLGF 383

  Fly   388 LAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAIL 452
            :|.|..|.:.||.:.|.|||||.||:.||.:|.:|:||.|||.|||.|||||||..:|...|.|:
 Frog   384 MASEQGVHISKVAESGPGLAFIAYPKAVTLMPFAPIWAALFFFMLLILGLDSQFVGVEGFITGIM 448

  Fly   453 DRFPN-----LRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLL-IAISECIL 511
            |.||.     :|: ::...|...:. :|..|...|..|||..||.|.|:|:...|| .|..||::
 Frog   449 DLFPQPINGFVRR-EVTAALCCLVC-FIIDLSMVTEGGMYVFQLFDYYSASGITLLWQAFWECVV 511

  Fly   512 IAWIYGSQRFLNDIQGMIGKR-----SWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYG-H 570
            |||:||:.||::||..|||.|     .|.|:        .:||...:.|..|:.|.|||..|. .
 Frog   512 IAWVYGADRFMDDIARMIGYRPLPYMKWCWS--------VLTPLVCVGIFVFHVVNYKPLTYNKS 568

  Fly   571 YVYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRIKHLLQPTAEWG 624
            ||||.|.:|:||.:.|..:|.|.|....::.|:..||  |:| .||| .|..||
 Frog   569 YVYPWWGEAIGWSLALASMLCIPLTVVCKMLRSKGSL--RER-WHLL-TTPVWG 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 245/559 (44%)
slc6a8lXP_012815966.1 SLC6sbd_CT1 61..654 CDD:271397 256/582 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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