DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a8l

DIOPT Version :10

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_012815966.1 Gene:slc6a8l / 100127575 XenbaseID:XB-GENE-5768780 Length:654 Species:Xenopus tropicalis


Alignment Length:639 Identity:269/639 - (42%)
Similarity:368/639 - (57%) Gaps:51/639 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SSKSGSAGVGGVGG----GGGVVCPSTAISGCASGTALIQLDATGPGAGGAGESEHERGTWTGRF 64
            :.|.|.:|...:.|    |||...|..        .|:| .....|..|.......||.|||.:.
 Frog    13 TEKPGCSGAPDMEGAETVGGGEAVPDE--------KAVI-APLVVPSMGQVKIPIPERETWTRQM 68

  Fly    65 DFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVY 129
            ||::|.:|::||||||||||||||.||||.||||:.:::.:.|:|:.|:|::.||:...|.:|.:
 Frog    69 DFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYLLIVFVGGIPVFFLEIALGQFMKQGGIAAW 133

  Fly   130 RRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQAD 194
             ...|||:|||...:::......||.:|:.|.::|:..||...|||..|...|::|.|......|
 Frog   134 -NIAPLFKGLGFASMVIVFFCNTYYIMILVWGLYYLVHSFTNTLPWATCGNPWNSKECTEVFLVD 197

  Fly   195 QCEATNGTYYLRTCHNATSAAENNITTLALGAL--KRPPAEEYFNNFVLGLSKGIEETGSIKLSL 257
            .|  .||     :..|.|.:  ..:..::..||  ||.|..|::...||.:|.|:.|.|.:...:
 Frog   198 HC--NNG-----SLANVTDS--GTLVNISCDALVNKRSPVIEFWERKVLQISGGLNEPGQLNWQM 253

  Fly   258 AACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQL 322
            ..||...|.||:.|:.|||:|:|||||||||||||||::|...|||||||..||::||.|:|.:|
 Frog   254 ILCLMATWVIVYFCIWKGVKSTGKVVYFTALFPYVVLIVLLAHGVTLPGALDGIVYYLKPNWSKL 318

  Fly   323 ANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGF 387
            |.||||.||..||||:.:...|.|..|.|||:|.||||:|:.|:|..|..||||||.|:||::||
 Frog   319 AEAQVWIDAGTQIFFSYAIGLGALTALGSYNRFHNNCYRDAYILAAINSTTSFFAGFVVFSVLGF 383

  Fly   388 LAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAIL 452
            :|.|..|.:.||.:.|.|||||.||:.||.:|.:|:||.|||.|||.|||||||..:|...|.|:
 Frog   384 MASEQGVHISKVAESGPGLAFIAYPKAVTLMPFAPIWAALFFFMLLILGLDSQFVGVEGFITGIM 448

  Fly   453 DRFPN-----LRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLL-IAISECIL 511
            |.||.     :|: ::...|...:. :|..|...|..|||..||.|.|:|:...|| .|..||::
 Frog   449 DLFPQPINGFVRR-EVTAALCCLVC-FIIDLSMVTEGGMYVFQLFDYYSASGITLLWQAFWECVV 511

  Fly   512 IAWIYGSQRFLNDIQGMIGKR-----SWFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYG-H 570
            |||:||:.||::||..|||.|     .|.|:        .:||...:.|..|:.|.|||..|. .
 Frog   512 IAWVYGADRFMDDIARMIGYRPLPYMKWCWS--------VLTPLVCVGIFVFHVVNYKPLTYNKS 568

  Fly   571 YVYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRIKHLLQPTAEWG 624
            ||||.|.:|:||.:.|..:|.|.|....::.|:..||  |:| .||| .|..||
 Frog   569 YVYPWWGEAIGWSLALASMLCIPLTVVCKMLRSKGSL--RER-WHLL-TTPVWG 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..597 CDD:395155 245/553 (44%)
Herpes_BLLF1 <884..1135 CDD:282904
slc6a8lXP_012815966.1 SLC6sbd_CT1 61..654 CDD:271397 256/582 (44%)
Blue background indicates that the domain is not in the aligned region.

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