DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlyT and slc6a14.1

DIOPT Version :9

Sequence 1:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_002939712.3 Gene:slc6a14.1 / 100127180 XenbaseID:XB-GENE-480827 Length:634 Species:Xenopus tropicalis


Alignment Length:601 Identity:280/601 - (46%)
Similarity:387/601 - (64%) Gaps:28/601 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 GAGESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFM 113
            |:|:...|||.|:.:.|:|||::||:||||||||||||.|.|||||||||:||||.:|||||.|:
 Frog    24 GSGDENKERGNWSKKSDYLLSMIGYAVGLGNVWRFPYLAYKNGGGAFLIPYTIMLALAGLPLFFL 88

  Fly   114 ELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNC 178
            |.|.||:::.|||.|:|. .|:.:|:|..|:||:..|.:|||:|||::::||||||..:|||.:|
 Frog    89 ECSMGQFSSSGPVLVWRA-VPILQGVGITMVLVTTFVSIYYNIIIAYSLYYMFASFQTILPWSDC 152

  Fly   179 EPAWSTKYCFSYAQADQCEA--TNGTYYLRTCHNATSAAENNITTLALGALKRP---PAEEYFNN 238
            . ||:.:.| |......|..  :|.|    ..:|.|...|.|:|.:....:...   |:::|:..
 Frog   153 F-AWADEKC-SKVTRGFCNVSLSNNT----VAYNLTWVKERNLTCIENSIVMEDVDLPSKQYWEK 211

  Fly   239 FVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVT 303
            ..|.||.|::|||.|...||.||.|||.||...|.||::||||||||||:|||:||:||.|||.|
 Frog   212 VTLRLSGGLDETGEIVWYLALCLLLAWIIVGAALFKGIKSSGKVVYFTAIFPYIVLIILLVRGAT 276

  Fly   304 LPGASTGILFYL--TPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIV 366
            |.||..||.:|:  ..:..:|..|:||.|||.||||:||.||||||.|||||||.||||.|:::|
 Frog   277 LEGAFNGIDYYIGTKSNITKLMEAEVWKDAATQIFFSLSTAWGGLIALSSYNKFHNNCYSDAIVV 341

  Fly   367 AFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVM 431
            ...|..||.|||..||||:|.:|...:..|.:|||.|.|||||.|||.:.:||:||:|:.|||.|
 Frog   342 CVTNCLTSVFAGFAIFSILGHMAFVTDKPVPEVVDSGFGLAFIAYPEALAKLPISPLWSFLFFFM 406

  Fly   432 LLTLGLDSQFALMETVTTAILDRFPN-LRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKY 495
            |||||||||||::||:.|:|.|.||. :::.:|.|.:...:..::.||...|.||:||:.|:|.:
 Frog   407 LLTLGLDSQFAMIETIITSIQDAFPQMMKRMRIPVTIGCCVILFLLGLLCVTQSGIYWVNLIDYF 471

  Fly   496 AANWSVLLIAISECILIAWIYGSQRFLNDIQGMIGKRSW-FWNFFWGIMWRYITPATLLFILFFN 559
            ...|::|..|:.|.:.|.||||..||:.||:.|||::.| || .:|...|..::|..|..||.::
 Frog   472 CGGWAILFSAVLELVGINWIYGGNRFIKDIEMMIGEKHWTFW-IWWRACWFVVSPLLLTAILLWS 535

  Fly   560 WVEYKPAKYGHYVYPMWADAVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRIKHLLQPTAEWG 624
            .:.:....||..|||.|..|:||.:....::.|.:||..:|.||      :..:....:....||
 Frog   536 LITFHSPTYGSVVYPTWGTAIGWCMICFCLIWIPIVAVLKIIRA------KGNVLQTCKAAQNWG 594

  Fly   625 PAGRPCVNLH-AERYQ 639
            ||    ::.| .|||:
 Frog   595 PA----LSQHRGERYK 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlyTNP_611836.2 SNF 57..603 CDD:249680 267/554 (48%)
slc6a14.1XP_002939712.3 SLC6sbd_ATB0 32..628 CDD:271391 277/593 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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