DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pippin and SIT1

DIOPT Version :10

Sequence 1:NP_726368.2 Gene:pippin / 37770 FlyBaseID:FBgn0034909 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_010849.3 Gene:SIT1 / 856644 SGDID:S000000791 Length:628 Species:Saccharomyces cerevisiae


Alignment Length:398 Identity:74/398 - (18%)
Similarity:134/398 - (33%) Gaps:138/398 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 SWIASVHSLATPFGSLLSGPLADYLGRRRTLILSVIPLLLGWSTLAIAKSIKVVIFARFLCGFAT 166
            |.:..:.::....|.:....|:|..||...:|:|:|...:|  |:..::::.:..||...|.:..
Yeast   109 STVNCIKTVIAAVGQIFFARLSDIFGRFSIMIVSIIFYSMG--TIIESQAVNITRFAVGGCFYQL 171

  Fly   167 GILGGPGQVYIAET-----AEPNLRSLLIGAPYVAYSSGILMVYSLGSM-----MYWR-SVAWCA 220
            |:   .|.:.|.|.     :..|.|.|.:..|.:.:   |:..:..|::     ..|: .:...|
Yeast   172 GL---TGIILILEVIASDFSNLNWRLLALFIPALPF---IINTWISGNVTSAIDANWKWGIGMWA 230

  Fly   221 NVLPL------LSMVSISFIPETPAWLLRNGHEKRALQALSFLRGSEISAQKELNDMKQRLAKER 279
            .:|||      :.|:.:.:        |...|.|..|:       .|..|   ||.:|       
Yeast   231 FILPLACIPLGICMLHMRY--------LARKHAKDRLK-------PEFEA---LNKLK------- 270

  Fly   280 VTTKTNENIFQLCCQRVAIKPLVIVIVFSLLQMFSGTFIVIF----------------------- 321
                     ::..|..:|...|.|:.:. |:.:|.|..:|.|                       
Yeast   271 ---------WKSFCIDIAFWKLDIIGML-LITVFFGCVLVPFTLAGGLKEEWKTAHIIVPEVIGW 325

  Fly   322 ------YAV-------------DMISEFGAEF----------------DSKQAAIATAV------ 345
                  |.:             |:|.:.|..|                |.....:..||      
Yeast   326 VVVLPLYMLWEIKYSRHPLTPWDLIQDRGIFFALLIAFFINFNWYMQGDYMYTVLVVAVHESIKS 390

  Fly   346 ----------VRVICCMVFCVVLIFVRRRRIMIVSGIGSGLFCLVLSVYQYARFDQPKMSYDVFV 400
                      |.||...:...:||.|||.:..|:.||.    |.::|......:.....::...:
Yeast   391 ATRITSLYSFVSVIVGTILGFILIKVRRTKPFIIFGIS----CWIVSFGLLVHYRGDSGAHSGII 451

  Fly   401 GAGCLLGY 408
            |:.||||:
Yeast   452 GSLCLLGF 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pippinNP_726368.2 MFS_GLUT6_8_Class3_like 59..495 CDD:340916 74/398 (19%)
SIT1NP_010849.3 MFS_ARN_like 70..582 CDD:340880 74/398 (19%)

Return to query results.
Submit another query.