DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4797 and ARN2

DIOPT Version :9

Sequence 1:NP_726368.2 Gene:CG4797 / 37770 FlyBaseID:FBgn0034909 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_011816.2 Gene:ARN2 / 856338 SGDID:S000001039 Length:620 Species:Saccharomyces cerevisiae


Alignment Length:556 Identity:94/556 - (16%)
Similarity:182/556 - (32%) Gaps:205/556 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SEFQCKKASYSSRKLSTIDEQDDDAANRRGMMHQILAT--------------------CAVLLLS 69
            |:.:.|....:..:|...::.|||::.|..|..::..|                    .|:.|.|
Yeast    11 SQTKRKNTEKNCNELMVDEKMDDDSSPRDEMKDKLKGTKSLIIRKSELMAKKYDTWQLKAIFLFS 75

  Fly    70 A-----GCGMPIGFSAILLPQLMDNNSTEIPIDVETGSWIASVHSLATPFGSLLSGPLADYLGRR 129
            |     ..|:........:...|::.|....|     |.::.:..:.:....::.|.|:|..||.
Yeast    76 AFICTFAYGLDSSIRGTYMTYAMNSYSAHSLI-----STVSVIVLMISAVSQVIFGGLSDIFGRL 135

  Fly   130 RTLILSVIPLLLGWSTLAIAKSIKVVIFARFLCGFATGILGGPGQVYIAETAEPNLRSLLIGAPY 194
            ...::|::..::|  |:..:::..|..:|.....:..|::|...||                   
Yeast   136 TLFLVSIVLYIVG--TIIQSQAYDVQRYAAGAVFYYVGLVGVMLQV------------------- 179

  Fly   195 VAYSSGILMVYSLGSMMYWRSVAWCANVLPLLSMVSISFIPETPAWLLRNGHEKRALQALSFLRG 259
                  :||: |..|.:.||              :..:.||..|:.:            .:::.|
Yeast   180 ------VLML-SDNSSLKWR--------------LFYTLIPSWPSII------------TTWVSG 211

  Fly   260 SEISAQKELNDMKQRLAKERVTTKTNENIFQLCCQRVAIKPLVIVIV------------------ 306
            |.:.|...|.:....:|....       ||.|||     .||::.::                  
Yeast   212 SVVEAANPLENWSWNIAMWAF-------IFPLCC-----IPLILCMLHMRWKVRNDVEWKELQDE 264

  Fly   307 ------FSLLQMFSGTFIVIFYAVDMISEFGAEFDSKQAAIATAVVRVICCMVFCVVLIFVRRRR 365
                  ..|:||    .:.:|:.:|::.                            ||:|     
Yeast   265 KSYYQTHGLVQM----LVQLFWKLDVVG----------------------------VLLF----- 292

  Fly   366 IMIVSGIGSGLFCLVLSVYQYARFDQPKMSYDVFVGAGCLLGYIIFNTALMVMP----------- 419
               .:|:|..|..|.|:......:...|:.....:|...:.|:|.:.:.|.::|           
Yeast   293 ---TAGVGCILVPLTLAGGVSTNWRNSKIIGPFVLGFVLVPGFIYWESRLALVPFAPFKLLKDRG 354

  Fly   420 -----GIMIGELFPARIRGRTAGGVFASMNVAL---------------FIFAKKFPAL------Q 458
                 |||   .|...:....||.::..:.||:               |:.|...|.|      .
Yeast   355 VWAPLGIM---FFICFVYQMAAGYLYTILVVAVDESASSATRIINLYSFVTAVVAPFLGLIVTRS 416

  Fly   459 AMLKMRGVFLVFGVSSFLLTAFMCLFQPETKGRSLE 494
            :.||.   :::||.|.:.:|  |.||.....|:..:
Yeast   417 SRLKS---YIIFGGSLYFIT--MGLFYRYRSGQDAD 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4797NP_726368.2 MFS 64..484 CDD:119392 82/485 (17%)
Sugar_tr 89..497 CDD:278511 79/467 (17%)
ARN2NP_011816.2 MFS_ARN_like 69..581 CDD:340880 85/498 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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