DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4797 and TMT1

DIOPT Version :9

Sequence 1:NP_726368.2 Gene:CG4797 / 37770 FlyBaseID:FBgn0034909 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001319055.1 Gene:TMT1 / 838676 AraportID:AT1G20840 Length:734 Species:Arabidopsis thaliana


Alignment Length:703 Identity:123/703 - (17%)
Similarity:201/703 - (28%) Gaps:307/703 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 NNSTEIPIDVETGSWIASVHSLATPFGSLLSGPLADYLGRRRTLILS-----VIPLLLGWSTLAI 148
            |....:|..|:  ..:.::..:.....:..|||::|:||||..||||     |..|::.||    
plant    33 NKDLNLPTSVQ--GLVVAMSLIGATVITTCSGPISDWLGRRPMLILSSVMYFVCGLIMLWS---- 91

  Fly   149 AKSIKVVIFARFLCGFATGILGGPGQVYIAETAEPNLRSLLIGAPYVAYSSGILMVY------SL 207
             .::.|:.|||.|.||..|:......|||:|||.|.:|..|...|....|.|:.:.|      ||
plant    92 -PNVYVLCFARLLNGFGAGLAVTLVPVYISETAPPEIRGQLNTLPQFLGSGGMFLSYCMVFTMSL 155

  Fly   208 GSMMYWRSVAWCANVLPLLSM-VSISFIPETPAWLLRNG---HEKRALQALS-----------FL 257
            .....||::....::..||.: :::.::||:|.||:..|   ..||.||.|.           .:
plant   156 SDSPSWRAMLGVLSIPSLLYLFLTVFYLPESPRWLVSKGRMDEAKRVLQQLCGREDVTDEMALLV 220

  Fly   258 RGSEISAQKEL------------------------------------------------------ 268
            .|.:|..:|.:                                                      
plant   221 EGLDIGGEKTMEDLLVTLEDHEGDDTLETVDEDGQMRLYGTHENQSYLARPVPEQNSSLGLRSRH 285

  Fly   269 ----------------------------------------------------------------- 268
                                                                             
plant   286 GSLANQSMILKDPLVNLFGSLHEKMPEAGGNTRSGIFPHFGSMFSTTADAPHGKPAHWEKDIESH 350

  Fly   269 ---------------------NDMKQRLAKERVTTKTNENI------------------------ 288
                                 ||::..|...:.|:...:.|                        
plant   351 YNKDNDDYATDDGAGDDDDSDNDLRSPLMSRQTTSMDKDMIPHPTSGSTLSMRRHSTLMQGNGES 415

  Fly   289 ---------------------------------------------------FQLCCQRVAIKP-- 300
                                                               ......|..:.|  
plant   416 SMGIGGGWHMGYRYENDEYKRYYLKEDGAESRRGSIISIPGGPDGGGSYIHASALVSRSVLGPKS 480

  Fly   301 ------------------------------LVIVIVFSLLQMFSGTFIVIFYAVDMISEFGAE-- 333
                                          ||:.:...:||.|||...|::|...::...|.:  
plant   481 VHGSAMVPPEKIAASGPLWSALLEPGVKRALVVGVGIQILQQFSGINGVLYYTPQILERAGVDIL 545

  Fly   334 -----FDSKQAAIATAVVRVICCMVFCVVLIFVRRRRIMIVSGIGSGLF----CLVLSVYQYARF 389
                 ..|..|:...:.:..:..:...||.:     |:|.|||..|.|.    .|::|:......
plant   546 LSSLGLSSISASFLISGLTTLLMLPAIVVAM-----RLMDVSGRRSLLLWTIPVLIVSLVVLVIS 605

  Fly   390 DQPKMS--YDVFVGAGCLLGYIIFNTALMVM-----PGIMIGELFPARIRGRTAGGVFASMNVAL 447
            :...:|  .:..:..||::.|..|    .||     |.|:..|:||.|:||...........:..
plant   606 ELIHISKVVNAALSTGCVVLYFCF----FVMGYGPIPNILCSEIFPTRVRGLCIAICAMVFWIGD 666

  Fly   448 FIFAKKFPALQAMLKMRGVFLVFGVSSFLLTAFMCLFQPETKGRSLEHIEDYF 500
            .|.....|.|.:.:.:.|||.::.....:...|:.:..|||||..||.|.|||
plant   667 IIVTYSLPVLLSSIGLVGVFSIYAAVCVISWIFVYMKVPETKGMPLEVITDYF 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4797NP_726368.2 MFS 64..484 CDD:119392 112/685 (16%)
Sugar_tr 89..497 CDD:278511 119/698 (17%)
TMT1NP_001319055.1 MFS 10..>208 CDD:421695 57/181 (31%)
MFS <509..706 CDD:421695 45/205 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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