DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4797 and TMT2

DIOPT Version :9

Sequence 1:NP_726368.2 Gene:CG4797 / 37770 FlyBaseID:FBgn0034909 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001190923.1 Gene:TMT2 / 829684 AraportID:AT4G35300 Length:739 Species:Arabidopsis thaliana


Alignment Length:669 Identity:113/669 - (16%)
Similarity:188/669 - (28%) Gaps:290/669 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 SGPLADYLGRRRTLILSVIPLLLGWSTLAIAKSIKVVIFARFLCGFATGILGGPGQVYIAETAEP 183
            ||.:||:||||..||||.|...:|...:..:.::.|::..|.|.||..|::.....:||:|||.|
plant    63 SGGVADWLGRRPMLILSSILYFVGSLVMLWSPNVYVLLLGRLLDGFGVGLVVTLVPIYISETAPP 127

  Fly   184 NLRSLLIGAPYVAYSSGILMVYSL-GSMMYWRSVAW--CANVLPLLSMV----SISFIPETPAWL 241
            .:|.||...|....|.|:.:.|.: ..|....|.:|  ...||.:.|:|    ::.|:||:|.||
plant   128 EIRGLLNTLPQFTGSGGMFLSYCMVFGMSLMPSPSWRLMLGVLFIPSLVFFFLTVFFLPESPRWL 192

  Fly   242 LRNG---HEKRALQAL------------------------------------------------- 254
            :..|   ..||.||.|                                                 
plant   193 VSKGRMLEAKRVLQRLRGREDVSGEMALLVEGLGIGGETTIEEYIIGPADEVTDDHDIAVDKDQI 257

  Fly   255 ----------------------------------------------------------------- 254
                                                                             
plant   258 KLYGAEEGLSWVARPVKGGSTMSVLSRHGSTMSRRQGSLIDPLVTLFGSVHEKMPDTGSMRSALF 322

  Fly   255 ----------------------------------------------------------------- 254
                                                                             
plant   323 PHFGSMFSVGGNQPRHEDWDEENLVGEGEDYPSDHGDDSEDDLHSPLISRQTTSMEKDMPHTAHG 387

  Fly   255 ---SFLRGSEI-----------------------------SAQKELNDMKQRLAKERVTTKTNEN 287
               :|..||::                             |.|||....:..|.:|........:
plant   388 TLSTFRHGSQVQGAQGEGAGSMGIGGGWQVAWKWTEREDESGQKEGGFKRIYLHQEGFPGSRRGS 452

  Fly   288 IFQL----------CCQRVAI------------------------------------------KP 300
            |..|          ..|..|:                                          :.
plant   453 IVSLPGGDGTGEADFVQASALVSQPALYSKDLLKEHTIGPAMVHPSETTKGSIWHDLHDPGVKRA 517

  Fly   301 LVIVIVFSLLQMFSGTFIVIFYAVDMISEFGAEF--------DSKQAAIATAVVRVICCMVFCVV 357
            ||:.:...:||.|||...|::|...::.:.|...        .|..:.:.:|:...:......|.
plant   518 LVVGVGLQILQQFSGINGVLYYTPQILEQAGVGILLSNMGISSSSASLLISALTTFVMLPAIAVA 582

  Fly   358 --LIFVRRRRIMIVSGIG---SGLFCLVLSVYQYARFDQPKMSYDVFVGAGCLLGYIIFNTALMV 417
              |:.:..||.::::.|.   :.|..||:|...:..    .:.:.|......:|.:..|......
plant   583 MRLMDLSGRRTLLLTTIPILIASLLVLVISNLVHMN----SIVHAVLSTVSVVLYFCFFVMGFGP 643

  Fly   418 MPGIMIGELFPARIRGRTAGGVFASMNVALFIFAKKFPALQAMLKMRGVFLVFGVSSFLLTAFMC 482
            .|.|:..|:||.|:||........:..:...|.....|.|...:.:.|||.::.:...:...|:.
plant   644 APNILCSEIFPTRVRGICIAICALTFWICDIIVTYSLPVLLKSIGLAGVFGMYAIVCCISWVFVF 708

  Fly   483 LFQPETKGRSLEHIEDYFN 501
            :..|||||..||.|.::|:
plant   709 IKVPETKGMPLEVITEFFS 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4797NP_726368.2 MFS 64..484 CDD:119392 104/650 (16%)
Sugar_tr 89..497 CDD:278511 111/663 (17%)
TMT2NP_001190923.1 MFS 14..>174 CDD:421695 38/110 (35%)
MFS <516..713 CDD:421695 39/200 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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