DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4797 and INT3

DIOPT Version :9

Sequence 1:NP_726368.2 Gene:CG4797 / 37770 FlyBaseID:FBgn0034909 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_181117.1 Gene:INT3 / 818146 AraportID:AT2G35740 Length:580 Species:Arabidopsis thaliana


Alignment Length:565 Identity:129/565 - (22%)
Similarity:226/565 - (40%) Gaps:132/565 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LLLSAGC-GMPIGFSAILLPQLMDNNSTEIPIDVETGSWIASVHSLATPFGSLLSGPLA----DY 125
            |.||||. |:..|::..::...:.....|.. :|:..:|:..:....|..|:::...:.    |.
plant    29 LALSAGIGGLLFGYNTGVIAGALLYIKEEFG-EVDNKTWLQEIIVSMTVAGAIVGAAIGGWYNDK 92

  Fly   126 LGRRRTLILSVIPLLLGWSTLAIAKSIKVVIFARFLCGFATGILGGPGQVYIAETAEPNLRSLLI 190
            .|||.:::::.:..|||...:.||.:..|:|..|.|.||..|:......:||:|.:...:|..|:
plant    93 FGRRMSVLIADVLFLLGALVMVIAHAPWVIILGRLLVGFGVGMASMTSPLYISEMSPARIRGALV 157

  Fly   191 --------GAPYVAYSSGILMVYSLGSMMYWRSVAWCANVLPLLSMVSISF---IPETPAWLLRN 244
                    |..:::|...:..|::.|:   ||   |...|..:.:::....   :||:|.||.||
plant   158 STNGLLITGGQFLSYLINLAFVHTPGT---WR---WMLGVSAIPAIIQFCLMLTLPESPRWLYRN 216

  Fly   245 GHEKRALQAL-----SFLRGSEISAQKELNDMKQRLAKERVTTKT-NENIFQLCCQRVAIKPLVI 303
            ..:..:...|     :.:..:||:|.||  .::...|.|.:...| ::.:.......|....|..
plant   217 DRKAESRDILERIYPAEMVEAEIAALKE--SVRAETADEDIIGHTFSDKLRGALSNPVVRHGLAA 279

  Fly   304 VIVFSLLQMFSGTFIVIFYAVDMISEFGAEFDSKQAAIATAVVRVICCMVFCVV-LIFV---RRR 364
            .|...:.|.|.|...|::|:..::...|  :.|.:.|:|.|::......|..|| ::||   .||
plant   280 GITVQVAQQFVGINTVMYYSPTILQFAG--YASNKTAMALALITSGLNAVGSVVSMMFVDRYGRR 342

  Fly   365 RIMIVSGIGSGLFCLVL--SVYQYARFDQPK---------------------------------- 393
            ::||:|..|. :.|||:  :|:..|....||                                  
plant   343 KLMIISMFGI-ITCLVILAAVFNEASNHAPKIDKRDSRNFAKNATCPAFAPFTASRSPPSNWNCM 406

  Fly   394 --MSYD--------------------------------VFVGAGC--LLGY----------IIFN 412
              :.||                                .|...||  ..||          |::.
plant   407 KCLQYDCGFCSNGAQEYAPGACIVQSADMKALCHSKGRTFFKDGCPSKFGYLAIVFLGLYIIVYA 471

  Fly   413 TALMVMPGIMIGELFPARIRGRTAGGVFASMN-VALFIFAKKFPALQAMLKMRGVFLVFGVSSFL 476
            ..:..:|.|:..|::|.|.|| .|||:.|..| ::..:.::.|..|...:...|.||:|..||.:
plant   472 PGMGTVPWIVNSEIYPLRYRG-LAGGIAAVSNWMSNLVVSETFLTLTNAVGSSGTFLLFAGSSAV 535

  Fly   477 LTAFMCLFQPETKGRSLEHIEDYFNGDNWLWFRRDRGYKTVNLQP 521
            ...|:.|..|||||...|.:|....|          |::...|:|
plant   536 GLFFIWLLVPETKGLQFEEVEKLLEG----------GFRPSLLRP 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4797NP_726368.2 MFS 64..484 CDD:119392 117/526 (22%)
Sugar_tr 89..497 CDD:278511 117/515 (23%)
INT3NP_181117.1 SP 1..555 CDD:273317 124/538 (23%)
MFS 31..>364 CDD:119392 84/344 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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