DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pippin and INT3

DIOPT Version :10

Sequence 1:NP_726368.2 Gene:pippin / 37770 FlyBaseID:FBgn0034909 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_181117.1 Gene:INT3 / 818146 AraportID:AT2G35740 Length:580 Species:Arabidopsis thaliana


Alignment Length:565 Identity:129/565 - (22%)
Similarity:226/565 - (40%) Gaps:132/565 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LLLSAGC-GMPIGFSAILLPQLMDNNSTEIPIDVETGSWIASVHSLATPFGSLLSGPLA----DY 125
            |.||||. |:..|::..::...:.....|.. :|:..:|:..:....|..|:::...:.    |.
plant    29 LALSAGIGGLLFGYNTGVIAGALLYIKEEFG-EVDNKTWLQEIIVSMTVAGAIVGAAIGGWYNDK 92

  Fly   126 LGRRRTLILSVIPLLLGWSTLAIAKSIKVVIFARFLCGFATGILGGPGQVYIAETAEPNLRSLLI 190
            .|||.:::::.:..|||...:.||.:..|:|..|.|.||..|:......:||:|.:...:|..|:
plant    93 FGRRMSVLIADVLFLLGALVMVIAHAPWVIILGRLLVGFGVGMASMTSPLYISEMSPARIRGALV 157

  Fly   191 --------GAPYVAYSSGILMVYSLGSMMYWRSVAWCANVLPLLSMVSISF---IPETPAWLLRN 244
                    |..:::|...:..|::.|:   ||   |...|..:.:::....   :||:|.||.||
plant   158 STNGLLITGGQFLSYLINLAFVHTPGT---WR---WMLGVSAIPAIIQFCLMLTLPESPRWLYRN 216

  Fly   245 GHEKRALQAL-----SFLRGSEISAQKELNDMKQRLAKERVTTKT-NENIFQLCCQRVAIKPLVI 303
            ..:..:...|     :.:..:||:|.||  .::...|.|.:...| ::.:.......|....|..
plant   217 DRKAESRDILERIYPAEMVEAEIAALKE--SVRAETADEDIIGHTFSDKLRGALSNPVVRHGLAA 279

  Fly   304 VIVFSLLQMFSGTFIVIFYAVDMISEFGAEFDSKQAAIATAVVRVICCMVFCVV-LIFV---RRR 364
            .|...:.|.|.|...|::|:..::...|  :.|.:.|:|.|::......|..|| ::||   .||
plant   280 GITVQVAQQFVGINTVMYYSPTILQFAG--YASNKTAMALALITSGLNAVGSVVSMMFVDRYGRR 342

  Fly   365 RIMIVSGIGSGLFCLVL--SVYQYARFDQPK---------------------------------- 393
            ::||:|..|. :.|||:  :|:..|....||                                  
plant   343 KLMIISMFGI-ITCLVILAAVFNEASNHAPKIDKRDSRNFAKNATCPAFAPFTASRSPPSNWNCM 406

  Fly   394 --MSYD--------------------------------VFVGAGC--LLGY----------IIFN 412
              :.||                                .|...||  ..||          |::.
plant   407 KCLQYDCGFCSNGAQEYAPGACIVQSADMKALCHSKGRTFFKDGCPSKFGYLAIVFLGLYIIVYA 471

  Fly   413 TALMVMPGIMIGELFPARIRGRTAGGVFASMN-VALFIFAKKFPALQAMLKMRGVFLVFGVSSFL 476
            ..:..:|.|:..|::|.|.|| .|||:.|..| ::..:.::.|..|...:...|.||:|..||.:
plant   472 PGMGTVPWIVNSEIYPLRYRG-LAGGIAAVSNWMSNLVVSETFLTLTNAVGSSGTFLLFAGSSAV 535

  Fly   477 LTAFMCLFQPETKGRSLEHIEDYFNGDNWLWFRRDRGYKTVNLQP 521
            ...|:.|..|||||...|.:|....|          |::...|:|
plant   536 GLFFIWLLVPETKGLQFEEVEKLLEG----------GFRPSLLRP 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pippinNP_726368.2 MFS_GLUT6_8_Class3_like 59..495 CDD:340916 123/537 (23%)
INT3NP_181117.1 MFS_HMIT_like 32..546 CDD:340918 116/526 (22%)

Return to query results.
Submit another query.