DRSC/TRiP Functional Genomics Resources

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Protein Alignment pippin and PMT2

DIOPT Version :10

Sequence 1:NP_726368.2 Gene:pippin / 37770 FlyBaseID:FBgn0034909 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_179210.1 Gene:PMT2 / 816110 AraportID:AT2G16130 Length:511 Species:Arabidopsis thaliana


Alignment Length:485 Identity:113/485 - (23%)
Similarity:204/485 - (42%) Gaps:51/485 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 RGMMHQILATCAVL--LLSAGCGMPIGF---SAILLPQLMDNNSTEIPIDVETGSWIASVHSLAT 112
            ||...:....||:|  :.|...|..||.   :||.:..  |...:::.:::..|  |.:::||  
plant    19 RGNRSRFAFACAILASMTSIILGYDIGVMSGAAIFIKD--DLKLSDVQLEILMG--ILNIYSL-- 77

  Fly   113 PFGSLLSGPLADYLGRRRTLILSVIPLLLGWSTLAIAKSIKVVIFARFLCGFATGILGGPGQVYI 177
             .||..:|..:|::|||.|::|:......|...:..|.:...::..||:.|...|.......||.
plant    78 -IGSGAAGRTSDWIGRRYTIVLAGFFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYT 141

  Fly   178 AETAEPNLRSLLIGAPYVAYSSGILMVY-------SLGSMMYWRSVAWCANVLPLLSMVSISFIP 235
            .|.|..:.|..|...|.:..:.|||:.|       .|...:.||.:.....|..:...:.:..:|
plant   142 TEVAPASSRGFLSSFPEIFINIGILLGYVSNYFFAKLPEHIGWRFMLGIGAVPSVFLAIGVLAMP 206

  Fly   236 ETPAWLLRNGHEKRALQALSFLRGSEISAQKELNDMKQR------LAKERVTTKTNENIFQLCCQ 294
            |:|.||:..|....|.:.|.....::..|...|||:|:.      :..:.:.....::..:...:
plant   207 ESPRWLVMQGRLGDAFKVLDKTSNTKEEAISRLNDIKRAVGIPDDMTDDVIVVPNKKSAGKGVWK 271

  Fly   295 RVAIKP-------LVIVIVFSLLQMFSGTFIVIFYAVDMISEFGAEFDSKQ--AAIATAVVRVIC 350
            .:.::|       |:..:.....|..||...|:.|:..:.|..|.:..:.|  |.:|..||:.:.
plant   272 DLLVRPTPSVRHILIACLGIHFSQQASGIDAVVLYSPTIFSRAGLKSKNDQLLATVAVGVVKTLF 336

  Fly   351 CMV-FCVVLIFVRRRRIMIVSGIGSGLFCLV---LSVYQYARFDQPKMSYDVFVGAGCLLGYI-I 410
            .:| .|:|..|  .||.::::.:|...|.|.   .|:....|.....:.:.:.:....::.:: .
plant   337 IVVGTCLVDRF--GRRALLLTSMGGMFFSLTALGTSLTVIDRNPGQTLKWAIGLAVTTVMTFVAT 399

  Fly   411 FNTALMVMPGIMIGELFPARIRGRTAGGVFASMNVAL-----FIFAKKFPALQAMLKMRGVFLVF 470
            |:.....:..:...|:||.|:|.:.     ||:.|.|     .|....|.:|...|.:.|.||:|
plant   400 FSLGAGPVTWVYASEIFPVRLRAQG-----ASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLF 459

  Fly   471 GVSSFLLTAFMCLFQPETKGRSLEHIEDYF 500
            ...:.....|...|.|||:|..||.||..|
plant   460 AGVAVAAWVFFFTFLPETRGVPLEEIESLF 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pippinNP_726368.2 MFS_GLUT6_8_Class3_like 59..495 CDD:340916 107/472 (23%)
PMT2NP_179210.1 MFS_PLT 32..485 CDD:340995 106/466 (23%)

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