DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4797 and ght3

DIOPT Version :9

Sequence 1:NP_726368.2 Gene:CG4797 / 37770 FlyBaseID:FBgn0034909 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_592790.1 Gene:ght3 / 2541758 PomBaseID:SPAC1F8.01 Length:555 Species:Schizosaccharomyces pombe


Alignment Length:487 Identity:112/487 - (22%)
Similarity:199/487 - (40%) Gaps:139/487 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 FGSLLSGPLADYLGRRRTL-----ILSVIPLLLGWSTLAIAKSIKVVIFARFLCGFATGILG--G 171
            ||::||.|..:.:|::.::     :..:..|||   ..|:...|:|:: .:.|.|...|.|.  .
pombe    71 FGAMLSSPFTERIGKKYSICFFSGVYIIAELLL---VTAVPSWIQVLV-GKILAGVGIGALSVLS 131

  Fly   172 PGQVYIAETAEPNLRSLLIGAPYVAYSSGILMV--------YSLGSMMYWRSVAWCANVL-PLLS 227
            ||  |.:|.|.|.:|..:: |.|..:|:|..:|        :.|.....||: ::..|:| .:|.
pombe   132 PG--YQSEVAPPQIRGAVV-ATYQIFSTGAALVAACINMGTHKLRKTASWRT-SFGINMLWGILL 192

  Fly   228 MVSISFIPETPAWLLRNGHEKRALQALSFLRGSEISAQKEL-----NDMKQRLAKERVTTKT--- 284
            ||.:.|:||:|.:|:..|.::.||:.:..:  :|:|.:.|:     |.:|..:..|....|.   
pombe   193 MVGVLFLPESPRYLIYKGRDEEALRIMCNM--AELSPESEIIQTNFNTIKSDIEIEMAGGKARWI 255

  Fly   285 ---NENI-FQLCCQRVAIKPLVIVIVFSLL-----------QMFSGT-----FI--VIFYAVDMI 327
               .::| ::.|..       .:|::|..|           |:|.||     |:  ||..|::..
pombe   256 EIFGKDIRYRTCLG-------FLVMLFRELIGNNYYFYYATQVFKGTGMTDIFLPAVILGAINFG 313

  Fly   328 SEFGA-----EFDSKQAAIATAVVRVICCMVFCVV----LIFV------RRRRIMIVSGIGSGLF 377
            :.|||     ....:...|..|..:.||..::..|    ||:.      |...:|||      ..
pombe   314 TTFGALYTIDNLGRRNPLIFGAAFQSICFFIYAAVGDRKLIYKNGTSDHRAGSVMIV------FS 372

  Fly   378 CLVLSVYQYARFDQPKMSYDVFVGAGCLLGYIIFNTALMVMPGIMIGELFPARIRGR-----TAG 437
            ||.|  :.|.                |..|         .|..:::||.||.|.|.:     |:|
pombe   373 CLFL--FSYC----------------CSWG---------PMGWVIVGETFPIRYRSKCASVATSG 410

  Fly   438 GVFASMNVALFIFAKKFPALQAMLKMRGVFLVFGVSSFLLTAFMCLF-QPETKGRSLEHIEDYFN 501
            ....:..::.|.     |.:...:..:..::...::  |.::||..| ..||||.:||.:.|.:.
pombe   411 NWLGNFMISFFT-----PFINNAIGFKLGYIYACIN--LFSSFMIFFLAKETKGLTLEEVNDLYM 468

  Fly   502 GDNWLWFRRDRGYKTVNLQPLEPLKDTRGLEA 533
            .               |::|.|..|..|.:|:
pombe   469 S---------------NIKPWESYKYVREIES 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4797NP_726368.2 MFS 64..484 CDD:119392 98/435 (23%)
Sugar_tr 89..497 CDD:278511 105/449 (23%)
ght3NP_592790.1 Sugar_tr 9..467 CDD:278511 106/452 (23%)
MFS 10..452 CDD:119392 99/437 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.