DRSC/TRiP Functional Genomics Resources

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Protein Alignment pippin and slcf-2

DIOPT Version :10

Sequence 1:NP_726368.2 Gene:pippin / 37770 FlyBaseID:FBgn0034909 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_508586.2 Gene:slcf-2 / 192084 WormBaseID:WBGene00006865 Length:595 Species:Caenorhabditis elegans


Alignment Length:542 Identity:109/542 - (20%)
Similarity:194/542 - (35%) Gaps:167/542 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 NRRGMMH--QILATCAVLLLSAGCGMPIGFSAILLPQLMDNNSTEIPIDVETGSWIASVHSLATP 113
            |:....|  ::|.:..:..|:.||     |.|:|:..   .:..::|:.|               
 Worm   106 NKENANHAWEMLVSSRIYGLAIGC-----FVAVLMSH---RHGRKLPVVV--------------- 147

  Fly   114 FGSLLSGPLADYLGRRRTLILSVIPLLLGWSTLAIAKSIKVVIFARFLCGFATGILGGPGQVYIA 178
                  |.:.|.:|...||:::.:|           ..:.|....|.:.|...|::...|.|.::
 Worm   148 ------GTILDVIGVVLTLLITSVP-----------HGVTVATVGRLINGIGQGMVQTAGSVMLS 195

  Fly   179 ETAEPNLRSLLIGAPYVAYSSGIL--MVYSL----GSMMYWRSVAWCANVLPLL----SMVSISF 233
            |......|..::....:....|.|  |..||    |:...|:   | |...|||    ::|.|..
 Worm   196 ELPPLKTRGTVLATLTMWACMGELGGMTISLDEFFGTPELWQ---W-AMGFPLLLLLPALVVIWH 256

  Fly   234 IPETPAWLLRNGHEKRALQALSFLRGSEISAQKELND--MKQRLAKERVTTKTNEN--------- 287
            .||:|.:|.....|..|.:|:|:.: |....::.:.:  ::::...|.:..|.:||         
 Worm   257 APESPRYLFIENREDEARKAMSYYQ-SPADCKQSIEEILLEKQFTMEMIKEKVDENGNTRKKEPA 320

  Fly   288 -IFQLCCQRVAIKPLVIVIVFSLLQMFSGTFI------VIFYAVDMISEFGAEFDSKQAA----- 340
             :....|:|:........:   |:.:|..||:      .|.|:..:...||......|.|     
 Worm   321 GLLSSICERLKDGRFTRAL---LIALFVQTFVHLDDWLWISYSTQIFENFGLTSGKAQTASLIMS 382

  Fly   341 IATAVVRVI---CCMVFCVVLIFVRRRRIMIVSGIGSGLFCLVLSVYQYARFDQPKMS------- 395
            :..||:.:.   |...|       .||.::||..|.|.:|..:..|     |..|.:|       
 Worm   383 LPQAVISIALLGCFDNF-------DRRTLLIVPTILSVIFGFLAIV-----FSSPGLSNVIPLFV 435

  Fly   396 -------YDVFVGAGCLLGYIIFNTALMVMPGIMIGELFPA--RIRGRTA--------GGVFASM 443
                   :|:.|.|      |...:|..::|     |||.|  ::.|...        |||..: 
 Worm   436 IIPILATFDLSVAA------ISGESAYAIVP-----ELFLANDKVLGSAIVGIVQNGFGGVLTN- 488

  Fly   444 NVALFIFAKKFPALQAMLKMRGVFLVFGVSSFLLTAFMCL----------FQPETKGRSLEHIED 498
                        .|...|...|:       |.:|..|:.:          :.|||.|::.:.|..
 Worm   489 ------------CLLTALNTHGI-------SNVLIPFVAMNTVYVGVTYKWLPETAGKTPQEINR 534

  Fly   499 YFN----GDNWLWFRRDRGYKT 516
            :|:    |.|...:.:.:..||
 Worm   535 HFSPEFPGTNVFLYLKHKASKT 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pippinNP_726368.2 MFS_GLUT6_8_Class3_like 59..495 CDD:340916 101/505 (20%)
slcf-2NP_508586.2 MFS 110..532 CDD:475125 102/512 (20%)

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