DRSC/TRiP Functional Genomics Resources

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Protein Alignment pippin and hmit-1.2

DIOPT Version :10

Sequence 1:NP_726368.2 Gene:pippin / 37770 FlyBaseID:FBgn0034909 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_507624.1 Gene:hmit-1.2 / 180206 WormBaseID:WBGene00013074 Length:613 Species:Caenorhabditis elegans


Alignment Length:519 Identity:111/519 - (21%)
Similarity:189/519 - (36%) Gaps:123/519 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 EIPIDVETGSWIASVHSLATPFGSLLSGPLADYLGRRRTLILSVIPLLLGWSTLAIAKSIKVVIF 157
            |:.:.:..|  :|:|       |:..||..:|..||:..:|.|.:..:.|....|:|.:..|::.
 Worm    69 EVIVSITPG--MAAV-------GAWFSGAGSDRYGRKPIIIGSTLIFVCGAVICAVAWTKIVMLI 124

  Fly   158 ARFLCGFATGILGGPGQVYIAETAEPNLRSLLIGAPYVAYSSGILMVYSLGSMM-YWR--SVAW- 218
            .|...|...|.......||:.|.:..::|..|:.|..:..|.|.::...:|.:. ||.  ::.| 
 Worm   125 GRIFLGVGIGFASMVVPVYLGEASPTHVRGTLVSAFAMMISFGQVVANIMGGVFSYWEPYTIGWR 189

  Fly   219 ----CANVLPLLSMVSISFIPETPAWLLRNGHEKRALQALSFLRGSEIS-AQKELNDMKQRLAKE 278
                .|.:..|:..|...|:||||.||..|||.::|.|.|..:.|.... .:.||.::| ..|:|
 Worm   190 LMFAFAGIPALIQFVCFIFLPETPRWLYENGHTEQAEQVLEKIYGGNTEWIEYELAEIK-TYAEE 253

  Fly   279 RVTTKTNENIFQLCCQRVAIKPLVIVIVF--SLLQMF---SGTFIVIFYAVDMISEFGAEFDSKQ 338
            |......|........|:...|.|:...|  |:||.|   :|...:::|..|:|...|.|  :..
 Worm   254 RQKQMEEEKKSGPVIWRILKTPHVLKACFIGSMLQAFQQLAGINTILYYTADIIRSAGIE--NYH 316

  Fly   339 AAIATAVVRVICCMVFCVVLIF----VRRRRIMIVS-----------GI---------------- 372
            ..|..:|:..||.::.....:|    :.||::.:.|           |:                
 Worm   317 TIIWISVILSICNLIGPFAPMFFIEKLGRRKLFLFSCAGVVVSLVLIGVSFLLVGNDSAPNFDRS 381

  Fly   373 -----------GSGLFCLVLS-------------------------------VYQYAR------- 388
                       |....||:||                               |..|:.       
 Worm   382 AYLLAGNYQSNGEAESCLMLSNCDSCVTSEHCGFCEDSETRTGFCLPVDHNDVTLYSSTGLCTNG 446

  Fly   389 FDQPKMSYD-----VFVGAGCLLGYII------------FNTALMVMPGIMIGELFPARIRGRTA 436
            .|:...|:.     |:....|...|.|            |:.....:|.::..|.:|...|....
 Worm   447 LDKSNSSFPNATSYVWQKHHCTTSYTILPIVMMGVYLLTFSCGFTSLPWVLNSEFYPMWARSTCV 511

  Fly   437 GGVFASMNVALFIFAKKFPALQAMLKMRGVFLVFGVSSFLLTAFMCLFQPETKGRSLEHIEDYF 500
            .....|..|...|.|..:.:|...:...|.|.::.:.:.:...|:....|||.|.|::.:|..|
 Worm   512 SISTLSNWVFNLIIALTYLSLTHAITKYGAFWLYAIFTIIAFIFIYFLVPETTGYSIDEVEMLF 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pippinNP_726368.2 MFS_GLUT6_8_Class3_like 59..495 CDD:340916 109/512 (21%)
hmit-1.2NP_507624.1 MFS 32..562 CDD:475125 104/504 (21%)

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