DRSC/TRiP Functional Genomics Resources

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Protein Alignment pippin and hmit-1.1

DIOPT Version :10

Sequence 1:NP_726368.2 Gene:pippin / 37770 FlyBaseID:FBgn0034909 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_507623.1 Gene:hmit-1.1 / 180205 WormBaseID:WBGene00013073 Length:606 Species:Caenorhabditis elegans


Alignment Length:596 Identity:135/596 - (22%)
Similarity:219/596 - (36%) Gaps:160/596 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ASYSSRKLSTIDEQDDDA-ANRRGMMHQILATCAVLLLSAGCGMPIGF-----SAILL-----PQ 85
            |::||      ..||..| ..:.|:...|||..:|:     .|...|:     ||.:|     |.
 Worm     5 AAFSS------SGQDKPAHTPKLGLFVYILAAASVI-----GGFLFGYDTSVVSAAMLYMPDAPG 58

  Fly    86 L--MDNNSTEIPIDVETGSWIASVHSLATPFGSLLSGPLADYLGRRRTLILSVIPLLLGWSTLAI 148
            |  ||....|:.:.:..|  :|:|       |||:||..:||:|||:.::.:.....:|  .|..
 Worm    59 LKPMDTVWQEVLVSISPG--MAAV-------GSLMSGTSSDYIGRRKVILGASAIFTIG--ALVC 112

  Fly   149 AKSIK--VVIFARFLCGFATGILGGPGQVYIAETAEPNLRSLLIGAPYVAYSSGILMV------- 204
            |.|:.  :::..|.|.|.|.|.......||:.|||..::|.:|:.|..:..|.|.::.       
 Worm   113 AASVNKIMLLVGRVLLGIAIGFASMIVPVYLGETAPTHVRGMLVAAFALMISFGQVVANITGGAF 177

  Fly   205 -----YSLGSMMYWRSVAWCANVLPLLSMVSISFIPETPAWLLRNGHEKRALQALSFLRGSEISA 264
                 |::|    ||.:...|.|..::..|...|:||||.||..||.|....:.|.    ...:.
 Worm   178 SYIDPYNVG----WRLMFAFAAVPSIIQFVCFMFLPETPRWLYENGFETETREVLE----KVYNG 234

  Fly   265 QKEL--NDMKQRLAKERVTTKTNENIFQL--CCQRVAIKPLVIVIVF--SLLQMF---SGTFIVI 320
            .||.  .:|.:.:|......|.||.....  ...|:...|.|:...|  |:||.|   :|...::
 Worm   235 DKEWVEYEMAEIIAFNEDQAKENEKAHASGPVIWRILKTPHVLKACFIGSMLQAFQQLAGINTIL 299

  Fly   321 FYAVDMISEFGAEFDSKQAAIATAVVRVICCMVFCVV---LIFVRRRRIMIVSGIGSGLFCLV-- 380
            :|..|:|...|  ..:....|..:|:..:|..:...|   ||....|||:.:...|..:..||  
 Worm   300 YYTADIIRSSG--ISNNHTTIWISVLLSLCNFIGPFVPMSLIEKVGRRIIFLFSCGLVVLSLVFI 362

  Fly   381 --------------LSVYQY--------------------------------------------A 387
                          |...||                                            |
 Worm   363 GVAFLLVNHDSAATLPANQYGSNFNSSYPDAKGCMAYSNCDYCVTTDACGFCHDANTKQGYCLPA 427

  Fly   388 RFDQPKM---------------------------SYDVFVGAGCLLGYIIFNTALMVMPGIMIGE 425
            .||.|::                           .|.:.....|.:..:.|::....:|.::..|
 Worm   428 GFDNPEVYSSTGSCTNSNGSIANNFKWEKYYCDTKYTLLPIIACGVYLLTFSSGFTSLPWVLNSE 492

  Fly   426 LFPARIRGRTAGGVFASMN-VALFIFAKKFPALQAMLKMRGVFLVFGVSSFLLTAFMCLFQPETK 489
            .:|...|. |...:..:.| |...|.|..:.:|..::...|.|.::...:.:...|:....||||
 Worm   493 FYPMWARS-TCVAISTTSNWVFNLIIALTYLSLTQVIGKYGAFWLYAGLTVIAFIFILFLVPETK 556

  Fly   490 GRSLEHIEDYF 500
            |.|:|.:|..|
 Worm   557 GYSIEEVEMLF 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pippinNP_726368.2 MFS_GLUT6_8_Class3_like 59..495 CDD:340916 125/561 (22%)
hmit-1.1NP_507623.1 MFS_HMIT_like 31..554 CDD:340918 116/549 (21%)

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