DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4797 and hmit-1.3

DIOPT Version :9

Sequence 1:NP_726368.2 Gene:CG4797 / 37770 FlyBaseID:FBgn0034909 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_497725.2 Gene:hmit-1.3 / 175458 WormBaseID:WBGene00010811 Length:604 Species:Caenorhabditis elegans


Alignment Length:563 Identity:122/563 - (21%)
Similarity:213/563 - (37%) Gaps:128/563 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 RRGMMHQILATCAVLLLSAGCGMPIGF-----SAILLPQLMDNNSTEIPIDVETGSWIASVHSLA 111
            :.|....:||..||:     .|...|:     ||.:|  .:.|.|...|:|......|.|:....
 Worm    23 KTGWFVYMLAFSAVI-----GGFLFGYDTGIVSAAML--YVPNASGIKPLDSVWQEIIVSITPGV 80

  Fly   112 TPFGSLLSGPLADYLGRRRTLILSVIPLLLGWSTLAIAKSIKVVIFARFLCGFATGILGGPGQVY 176
            ...|||.|||.:|:|||::.:|.:.:...:|....|.|.:..:::..|.|.|.|.|.......:|
 Worm    81 AAIGSLCSGPGSDFLGRKKIIIGASVTFTIGAIICAAAWTKIILLIGRILLGLAIGFASMIVPIY 145

  Fly   177 IAETAEPNLRSLLIGAPYVAYSSGILMVYSLG--------SMMYWRSVAWCANVLPLLSMVSISF 233
            ::|.:..::|..|:....:..:.|:::...:|        ..:.||.:...|.|..::..|...|
 Worm   146 VSEASPSHIRGKLVTGFQLMITVGLVIANIIGGAFSYVDPDQVGWRLMFAFAAVPAIIQFVCFLF 210

  Fly   234 IPETPAWLLRNGHEKRALQALS-FLRGSEISAQKELNDM----KQRLAKERVTTKTNENIFQLCC 293
            :||:|.||..:|....|.:.|: ...|.......|:|::    ::.|..:.........|.    
 Worm   211 LPESPRWLYEHGRTVEAREVLTRIYNGHTEWVDYEINEISFSYEEELRAKAEHAGNGPTII---- 271

  Fly   294 QRVAIKPLV--IVIVFSLLQMF---SGTFIVIFYAVDMISEFGAEFDSKQA---AIATAVVRVIC 350
             |:...|.|  .:|:.||||||   ||...|::|..::|...|.: |:...   ::.|:.:..:.
 Worm   272 -RILKTPHVRKAMIIGSLLQMFQQLSGINTVMYYTGNIIRSAGVK-DNHTTIWISVGTSAINFLG 334

  Fly   351 CMVFCVVLIFVRRRRIMIVSGIGSGLFCLVLSVY-------QYARFDQPK--MSYDVFV--GAGC 404
            ..:...::..|.||.:::||.||..||.:.:.|.       ....|||..  ::|:..|  .|.|
 Worm   335 TFIPIALVERVGRRVLLLVSMIGVILFLIAMGVSFLLINNDSLRTFDQQNYTLNYNPSVKHAAKC 399

  Fly   405 L-----------------------LGYII------------------------------------ 410
            |                       .||.:                                    
 Worm   400 LKYSNCDFCVTDENCGFCESKVAKKGYCLPFPSDDSSDYSATGICEFSNLTNNGTDFEWEDTYCH 464

  Fly   411 -----------------FNTALMVMPGIMIGELFPARIRGRTAGGVFASMN-VALFIFAKKFPAL 457
                             |:.....:|.::..|.:|...|. ||..|..:.| :...|.:..|.:|
 Worm   465 TKFTVLPIIIMVFYLLSFSAGYAPLPWVLNAEFYPLWARS-TAVSVSTACNWIFNLIVSLTFLSL 528

  Fly   458 QAMLKMRGVFLVFGVSSFLLTAFMCLFQPETKGRSLEHIEDYF 500
            .......|.|.::...:.:...|:..|.|||||.|::.:|..|
 Worm   529 SQAATKYGTFFIYCGCTMVALVFVFFFVPETKGYSIDEVEMLF 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4797NP_726368.2 MFS 64..484 CDD:119392 110/533 (21%)
Sugar_tr 89..497 CDD:278511 110/516 (21%)
hmit-1.3NP_497725.2 MFS 34..558 CDD:421695 111/537 (21%)
MFS <190..>249 CDD:421695 17/58 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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