DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nxt1 and Nxt2

DIOPT Version :9

Sequence 1:NP_611833.1 Gene:Nxt1 / 37769 FlyBaseID:FBgn0028411 Length:133 Species:Drosophila melanogaster
Sequence 2:XP_006257422.1 Gene:Nxt2 / 315352 RGDID:1560204 Length:198 Species:Rattus norvegicus


Alignment Length:136 Identity:57/136 - (41%)
Similarity:81/136 - (59%) Gaps:4/136 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSDLKAKVESCARTADTFTRLYYASVDNRRQQIGRLYLDNATLSWNGNGAIGRQMIESYFQELP 65
            |..|.|..|:...|.|:.|..:||.::|.||..:.|||||.|||.||||...|.:.:.::|:.||
  Rat    59 MAVDFKMYVDQACRAAEEFVNIYYETMDKRRHALVRLYLDKATLIWNGNVVTGLEALANFFEMLP 123

  Fly    66 SSNHQLNTLDAQPIVDQAVSNQLAYLIMASGSVKFADQQLRKFQQTFIVTAENDK----WKVVSD 126
            ||..|:|.||.||:.:||...|...|::.||.|||...:...|.|.|::||::..    ||:.||
  Rat   124 SSEFQINMLDCQPVHEQATQYQTTVLVVTSGVVKFDGNKQHFFNQNFLLTAQSTPNSTVWKIASD 188

  Fly   127 CYRMQE 132
            |:|.|:
  Rat   189 CFRFQD 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nxt1NP_611833.1 NTF2 11..132 CDD:238403 52/124 (42%)
Nxt2XP_006257422.1 NTF2 69..194 CDD:238403 52/124 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352092
Domainoid 1 1.000 115 1.000 Domainoid score I5882
eggNOG 1 0.900 - - E1_KOG4353
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 125 1.000 Inparanoid score I4614
OMA 1 1.010 - - QHG56125
OrthoDB 1 1.010 - - D1450028at2759
OrthoFinder 1 1.000 - - FOG0004415
OrthoInspector 1 1.000 - - otm44677
orthoMCL 1 0.900 - - OOG6_104429
Panther 1 1.100 - - LDO PTHR12612
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4218
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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