DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nxt1 and Nxt2

DIOPT Version :10

Sequence 1:NP_611833.1 Gene:Nxt1 / 37769 FlyBaseID:FBgn0028411 Length:133 Species:Drosophila melanogaster
Sequence 2:NP_001277461.1 Gene:Nxt2 / 237082 MGIID:2147914 Length:198 Species:Mus musculus


Alignment Length:133 Identity:55/133 - (41%)
Similarity:80/133 - (60%) Gaps:4/133 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DLKAKVESCARTADTFTRLYYASVDNRRQQIGRLYLDNATLSWNGNGAIGRQMIESYFQELPSSN 68
            :.|..|:...|.|:.|..:||.::|.||..:.|||||.|||.||||...|.:.:.::|:.||||.
Mouse    62 NFKTYVDQACRAAEEFVNIYYETMDKRRHALVRLYLDKATLIWNGNVVTGLEALANFFEMLPSSE 126

  Fly    69 HQLNTLDAQPIVDQAVSNQLAYLIMASGSVKFADQQLRKFQQTFIVTAENDK----WKVVSDCYR 129
            .|:|.||.||:.:||...|...|::.||.|||...:...|.|.|::||::..    ||:.|||:|
Mouse   127 FQINMLDCQPVHEQATQCQTTVLVVTSGVVKFDGNKQHFFNQNFLLTAQSTPNSTVWKIASDCFR 191

  Fly   130 MQE 132
            .|:
Mouse   192 FQD 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nxt1NP_611833.1 NTF2 11..132 CDD:238403 52/124 (42%)
Nxt2NP_001277461.1 NTF2 69..194 CDD:238403 52/124 (42%)

Return to query results.
Submit another query.