DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5543 and WDR46

DIOPT Version :9

Sequence 1:NP_611832.1 Gene:CG5543 / 37768 FlyBaseID:FBgn0034908 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_016866973.1 Gene:WDR46 / 9277 HGNCID:13923 Length:754 Species:Homo sapiens


Alignment Length:679 Identity:128/679 - (18%)
Similarity:219/679 - (32%) Gaps:233/679 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 IEKARVT-RPGMDKK-REESKPKEDDQKDEEEEDVIGPLP-PAVTTDKEKATKESSKDEDSDDDD 153
            ::|:|:: :|.:.|| ||...|:........::...||.| |.....|.....:|.|...|....
Human    64 LKKSRISKKPQVPKKPREWKNPESQRGLSGTQDPFPGPAPVPVEVVQKFCRIDKSRKLPHSKAKT 128

  Fly   154 YSSDE--DSDDEQSLAKRIPYTHEVQMQHGSRAVLALAGDPSGARLVSGSIDYDMCFWDFA---- 212
            .|..|  ::::|::..|            .:|:.|.||.:|.......|.....:|..|..    
Human   129 RSRLEVAEAEEEETSIK------------AARSELLLAEEPGFLEGEDGEDTAKICQADIVEAVD 181

  Fly   213 ------GMDSSMRSFRQLQPCENHPIRSLQYSVTG------------------------------ 241
                  ..|.::|.|        .|.| |.||.||                              
Human   182 IASAAKHFDLNLRQF--------GPYR-LNYSRTGRHLAFGGRRGHVAALDWVTKKLMCEINVME 237

  Fly   242 ----------DMILVISGNAQAKVLDRDGFEKLECCKGDQYISDMSRTKGHVAQLTSGCWHPFNR 296
                      :.:|.::.|....:.|..|.| |.|.:....::.:.             :.||: 
Human   238 AVRDIRFLHSEALLAVAQNRWLHIYDNQGIE-LHCIRRCDRVTRLE-------------FLPFH- 287

  Fly   297 EQFLTAALDGTLRIWQGLKSKEQLQVIK----TRAQGGLRTNAASCN-FNRDATLIAAGCVDGSI 356
              ||.|....|     |..:...:.|.|    ..|:.| |.:..|.| :|   .:|..|..:|::
Human   288 --FLLATASET-----GFLTYLDVSVGKIVAALNARAG-RLDVMSQNPYN---AVIHLGHSNGTV 341

  Fly   357 QTWD-TRKMFVNTTHCVRDAHQKGSEITSIVFSYMGQQLATRSNDETMKLWDLRQFKQPLHTWTN 420
            ..|. ..|..:....|    |:.|  :.::.....|..:||...|..:|::|||...|||.|.| 
Human   342 SLWSPAMKEPLAKILC----HRGG--VRAVAVDSTGTYMATSGLDHQLKIFDLRGTYQPLSTRT- 399

  Fly   421 LFSRYDTTDCCFSPDDRLLVTGESLPKGQAEANLYFYSTKSYEEVQRIPVSNAHVVKTLW----- 480
                                    ||.|   |....:|.:.      :.|:....|..:|     
Human   400 ------------------------LPHG---AGHLAFSQRG------LLVAGMGDVVNIWAGQGK 431

  Fly   481 --HPKLNQLFVSCGNGTIKCYYDEHR---SIRGAKLCVVKTHRKRQPMEMV-------GVSQIIT 533
              .|.|.|.:::            ||   .:.|.:.|         |.|.|       |::.::.
Human   432 ASPPSLEQPYLT------------HRLSGPVHGLQFC---------PFEDVLGVGHTGGITSMLV 475

  Fly   534 PHA-LPLF-----RQEKSRTSRKRME-KARMDPVKSQ--------RPDLPITSGQGGRVASSGGT 583
            |.| .|.|     ...:||..|:..| ||.::.|.::        ..::.:.|.:.|:...    
Human   476 PGAGEPNFDGLESNPYRSRKQRQEWEVKALLEKVPAELICLDPRALAEVDVISLEQGKKEQ---- 536

  Fly   584 LSSYVIRNLGLSKRVDDDQDPR---------EAILKYAKDAAE-----NPYWIAPAYKQTQPKAI 634
                 |..||...:......|:         .:::|..:...:     |.:|..|...|..|..:
Human   537 -----IERLGYDPQAKAPFQPKPKQKGRSSTASLVKRKRKVMDEEHRVNEHWHGPGLPQAAPSCL 596

  Fly   635 --------FSEKLPADEPATKKPKTEADK 655
                    .|..:|...| :..|:|.:.:
Human   597 CLCPCQPATSHSVPVSSP-SPVPRTRSGR 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5543NP_611832.1 WD40 <172..519 CDD:225201 76/412 (18%)
WD40 180..497 CDD:295369 72/379 (19%)
WD40 repeat 185..227 CDD:293791 10/51 (20%)
WD40 repeat 233..268 CDD:293791 13/74 (18%)
WD40 repeat 273..329 CDD:293791 10/59 (17%)
WD40 repeat 337..374 CDD:293791 9/38 (24%)
WD40 repeat 382..419 CDD:293791 12/36 (33%)
WD40 repeat 427..469 CDD:293791 5/41 (12%)
WD40 repeat 475..497 CDD:293791 5/28 (18%)
WDR46XP_016866973.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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