Protein Alignment CG5543 and snrnp40

DIOPT Version :9

• Sequence 1: NP_611832.1
• Gene: CG5543 / 37768
• FlyBaseID: FBgn0034908
• Length: 655
• Species: Drosophila melanogaster
• Sequence 2: NP_001025544.1
• Gene: snrnp40 / 594941
• XenbaseID: XB-GENE-957415
• Length: 337
• Species: Xenopus tropicalis
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5543	NP_611832.1	WD40	<172..519	CDD:225201
		WD40	180..497	CDD:295369
		WD40 repeat	185..227	CDD:293791
		WD40 repeat	233..268	CDD:293791
		WD40 repeat	273..329	CDD:293791
		WD40 repeat	337..374	CDD:293791
		WD40 repeat	382..419	CDD:293791
		WD40 repeat	427..469	CDD:293791
		WD40 repeat	475..497	CDD:293791
snrnp40	NP_001025544.1	WD40	42..331	CDD:238121
		WD40 repeat	50..87	CDD:293791
		WD40 repeat	92..128	CDD:293791
		WD40 repeat	135..170	CDD:293791
		WD40 repeat	176..212	CDD:293791
		WD40 repeat	218..258	CDD:293791
		WD40 repeat	268..292	CDD:293791
		WD40 repeat	310..332	CDD:293791

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910