DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5543 and Wdr70

DIOPT Version :9

Sequence 1:NP_611832.1 Gene:CG5543 / 37768 FlyBaseID:FBgn0034908 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001074871.1 Gene:Wdr70 / 545085 MGIID:1921020 Length:657 Species:Mus musculus


Alignment Length:643 Identity:285/643 - (44%)
Similarity:408/643 - (63%) Gaps:63/643 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LKEVMGISGFGRKAAKVFDIN---EQ-----IEKARVTRPGMDKKREESKPKE------------ 113
            |...||.:|||:| |:.||:.   ||     :|::|.|....:|:.|.::.||            
Mouse    21 LAVTMGFTGFGKK-ARTFDLEAMFEQTRRTAVERSRKTLEAREKEEEMNREKELRKQIEDMEPAP 84

  Fly   114 ------------------------DDQKDEEEEDVIG-PLPPAVTTDKEKATKESS--------- 144
                                    ||..|..::::|| ||||.:..:......|.:         
Mouse    85 SSSSAARERSQSSCRDTSSSDSESDDSSDSSDDELIGPPLPPKMVGESVTTVDEGTLGPLPPPLC 149

  Fly   145 -KDEDSDDDDYSSDEDSDDEQSLAKRIPYTHEVQMQHGSRAVLALAGDPSGARLVSGSIDYDMCF 208
             :.||.|||:.   :|..:|.:..:|||.:||:.::||::.|.||..||||||||:|..|||:.|
Mouse   150 EEGEDDDDDEL---DDEGEEDNPVQRIPDSHEITLRHGTKTVSALGLDPSGARLVTGGYDYDVKF 211

  Fly   209 WDFAGMDSSMRSFRQLQPCENHPIRSLQYSVTGDMILVISGNAQAKVLDRDGFEKLECCKGDQYI 273
            |||||||:|.::||.|||||.|.|:|||||.|||||||:||::||||:||||||.:||.||||||
Mouse   212 WDFAGMDASFKAFRSLQPCECHQIKSLQYSNTGDMILVVSGSSQAKVIDRDGFEVMECIKGDQYI 276

  Fly   274 SDMSRTKGHVAQLTSGCWHPFNREQFLTAALDGTLRIWQGLKSKEQLQVIKTRAQGGLRTNAASC 338
            .||:.||||.|.|.:|.|||..:.:|:|.:.|.|:|:|:....|:|..|.|.|...|.:....:|
Mouse   277 VDMANTKGHTAMLHTGSWHPKIKGEFMTCSNDATVRLWEVENPKKQKSVFKPRTMQGKKVIPTTC 341

  Fly   339 NFNRDATLIAAGCVDGSIQTWDTRKMFVNTTHCVRDAHQKGSEITSIVFSYMGQQLATRSNDETM 403
            .::||..|:||.|.:||||.|| |.:.|:.....:.||..|::.:.:.|||.|..||:|..|:|:
Mouse   342 TYSRDGNLVAAACQNGSIQIWD-RNLTVHPKFHYKQAHDPGTDTSCVAFSYDGNVLASRGGDDTL 405

  Fly   404 KLWDLRQFKQPLHTWTNLFSRYDTTDCCFSPDDRLLVTGESLPKGQAEANLYFYSTKSYEEVQRI 468
            ||||:|||.:||.:.::|.:.:..|||||||||:|:|||.|:.:|.....|.|...::::.|..|
Mouse   406 KLWDVRQFNKPLFSASDLPTLFPMTDCCFSPDDKLIVTGTSVQRGCGSGKLVFLERRTFQRVYEI 470

  Fly   469 PVSNAHVVKTLWHPKLNQLFVSCGNGTIKCYYDEHRSIRGAKLCVVKTHRKRQPMEMVGVSQIIT 533
            .:::|.||:.||||||||:.|..|||..|.|||.::|.||||||||||.||.:..|.:....|||
Mouse   471 HITDASVVRCLWHPKLNQIMVGTGNGLAKVYYDPNKSQRGAKLCVVKTQRKAKQAETLTQDYIIT 535

  Fly   534 PHALPLFRQEKSRTSRKRMEKARMDPVKSQRPDLPITS-GQGGRVASSGGTLSSYVIRNLGLSKR 597
            |||||:||:.:.|::||::||.|:||:||.:|:.|:.. |:||||.:.|||||||:::|:.|.| 
Mouse   536 PHALPMFREPRQRSTRKQLEKDRLDPLKSHKPEPPVAGPGRGGRVGTHGGTLSSYIVKNIALDK- 599

  Fly   598 VDDDQDPREAILKYAKDAAENPYWIAPAYKQTQPKAIFSEKLPADEPATKKPKTEADK 655
             .||.:||||||::||.|.:||||::|||.:||||.:|::....||.:..:|:.:..|
Mouse   600 -TDDSNPREAILRHAKAAEDNPYWVSPAYSKTQPKTMFAQVESDDEESKNEPEWKKRK 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5543NP_611832.1 WD40 <172..519 CDD:225201 179/346 (52%)
WD40 180..497 CDD:295369 162/316 (51%)
WD40 repeat 185..227 CDD:293791 28/41 (68%)
WD40 repeat 233..268 CDD:293791 26/34 (76%)
WD40 repeat 273..329 CDD:293791 24/55 (44%)
WD40 repeat 337..374 CDD:293791 15/36 (42%)
WD40 repeat 382..419 CDD:293791 18/36 (50%)
WD40 repeat 427..469 CDD:293791 18/41 (44%)
WD40 repeat 475..497 CDD:293791 14/21 (67%)
Wdr70NP_001074871.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 285/643 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..172 26/131 (20%)
WD40 180..501 CDD:421866 163/321 (51%)
WD 1 183..222 26/38 (68%)
WD40 repeat 188..230 CDD:293791 28/41 (68%)
WD 2 230..271 30/40 (75%)
WD40 repeat 236..284 CDD:293791 35/47 (74%)
WD 3 284..324 16/39 (41%)
WD40 repeat 289..327 CDD:293791 14/37 (38%)
WD 4 333..372 16/39 (41%)
WD40 repeat 339..373 CDD:293791 15/34 (44%)
WD 5 379..418 18/38 (47%)
WD40 repeat 380..421 CDD:293791 19/40 (48%)
WD 6 424..469 18/44 (41%)
WD40 repeat 429..470 CDD:293791 18/40 (45%)
WD 7 472..511 21/38 (55%)
WD40 repeat 477..501 CDD:293791 15/23 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 543..584 18/40 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 634..657 5/23 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834473
Domainoid 1 1.000 261 1.000 Domainoid score I1951
eggNOG 1 0.900 - - E1_KOG0772
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9972
Inparanoid 1 1.050 556 1.000 Inparanoid score I1106
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55687
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005020
OrthoInspector 1 1.000 - - oto94941
orthoMCL 1 0.900 - - OOG6_102528
Panther 1 1.100 - - LDO PTHR16017
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1893
SonicParanoid 1 1.000 - - X4081
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

Return to query results.
Submit another query.