DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5543 and CG8064

DIOPT Version :9

Sequence 1:NP_611832.1 Gene:CG5543 / 37768 FlyBaseID:FBgn0034908 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_650705.1 Gene:CG8064 / 42196 FlyBaseID:FBgn0038597 Length:922 Species:Drosophila melanogaster


Alignment Length:583 Identity:102/583 - (17%)
Similarity:210/583 - (36%) Gaps:177/583 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 NGGGFKKMDKEQMIRQIEDVAEDLESQHLKEVMGISGFGRKAAKVFDINEQIEKARVTRPGMDKK 105
            |.|..::..|.:.:..:.|.:|.:.|.|                  ..|:.||...:..|...||
  Fly   257 NCGTIQRAGKGRTVNLVTDPSERVISCH------------------GTNDLIENFYICTPDEVKK 303

  Fly   106 REESKPKEDDQKDEEEEDVIGPLPPAVTTDKEKATKESSKDEDSDDDDYSSDEDSDDEQSLAKRI 170
            |...:.|::                          |:.::||.||:...|:      ||||:..|
  Fly   304 RLAKRLKKE--------------------------KKVAEDEGSDEAKLST------EQSLSDEI 336

  Fly   171 PYTHEVQMQHGSRAVLALAGDPSGARLVSGSIDYDMCFWDFAGMDSSMRSFRQLQPC-------- 227
            .....::.:...:::..:.|.....|::....:..:|.:   .:::|:::.:...|.        
  Fly   337 KRLESIRAKQKIKSIDVVLGQNQELRVLVSLANNSLCLY---SLEASIKTRKATDPSAKLLRSLT 398

  Fly   228 ---ENHPIRSLQYSVTGDMILVISGNAQA-KVLDRDGFEKLE--------CCK---GDQYI---- 273
               ....:||:.:|  .|.:.:.||..:: |..|||..:.|.        |.|   ||:|:    
  Fly   399 RLGHQSEVRSVCFS--NDSLAIGSGAGESFKFWDRDAMQCLRTVPTDYILCSKFVPGDRYVLLGM 461

  Fly   274 ------------SD-MSRTKGHVAQLTS--------GCWHPFNREQFLTAALDGTLRIW------ 311
                        :| :.....|..:|.|        ||         :|.:.|.|::||      
  Fly   462 KSGKLLIVDVAAADIVEEIPAHEGELWSIAILPDQKGC---------VTGSGDTTVKIWTFELID 517

  Fly   312 --QGLKSKEQLQVIKTRAQGGLRTNAASCNFNRDATLIAAGCVDGSIQTW--DTRKMFVNTTHCV 372
              :|....:.|.::..... .|.........:.|...:|.|.:|.:::.:  ||.|.:::..   
  Fly   518 AGEGAAQTKVLSLLHKNTL-KLEETVLCLAVSPDMKYLAVGLLDATVKVFFLDTFKFYLSLY--- 578

  Fly   373 RDAHQKGSEITSIVFSYMGQQLATRSNDETMKLWDLRQFKQPLHTWTNLFSRYDTTDC---CFSP 434
              .|:  ..:..:..||....:.|.|.|..:|:|.|                 :..||   .|:.
  Fly   579 --GHK--LPVICLDISYDSNLIVTGSADRNVKVWGL-----------------NFGDCHRSIFAH 622

  Fly   435 DDRLLVTGESLPKGQAEANLYFYSTK----------SYEEVQRIP--VSNAHVVKTLWHPKLNQL 487
            ||.:: :.:.:|:    .:::|...|          ::|::..:|  :..|:.:..  .|. .:.
  Fly   623 DDSVM-SVQFIPR----THMFFTCGKDGKVKQWDGDNFEKILTLPGHIGEAYCLSV--SPN-GRY 679

  Fly   488 FVSCGNG-TIKCY--YDEHRSIRGAKLCVVKTHRKRQPMEMVGVSQIITPHALPLFRQEKSRT 547
            .|:||:. |::.:  .||...::.    |.:..|::...|.:...:..|...||..:....:|
  Fly   680 LVTCGSDRTLRMFERTDETIVLKD----VQEEEREQMENEQLATGEDNTVPLLPGLKMPSRKT 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5543NP_611832.1 WD40 <172..519 CDD:225201 70/422 (17%)
WD40 180..497 CDD:295369 67/390 (17%)
WD40 repeat 185..227 CDD:293791 4/41 (10%)
WD40 repeat 233..268 CDD:293791 12/43 (28%)
WD40 repeat 273..329 CDD:293791 13/88 (15%)
WD40 repeat 337..374 CDD:293791 7/38 (18%)
WD40 repeat 382..419 CDD:293791 8/36 (22%)
WD40 repeat 427..469 CDD:293791 9/54 (17%)
WD40 repeat 475..497 CDD:293791 5/22 (23%)
CG8064NP_650705.1 WD40 <45..288 CDD:225201 7/48 (15%)
WD40 60..511 CDD:295369 56/317 (18%)
WD40 repeat 69..108 CDD:293791
WD40 repeat 113..149 CDD:293791
WD40 repeat 156..194 CDD:293791
WD40 repeat 200..236 CDD:293791
WD40 331..702 CDD:225201 72/417 (17%)
WD40 repeat 349..398 CDD:293791 5/51 (10%)
WD40 401..693 CDD:238121 62/335 (19%)
WD40 repeat 408..441 CDD:293791 10/34 (29%)
WD40 repeat 446..482 CDD:293791 6/35 (17%)
WD40 repeat 487..535 CDD:293791 11/56 (20%)
WD40 repeat 543..578 CDD:293791 7/34 (21%)
WD40 repeat 584..621 CDD:293791 10/53 (19%)
WD40 repeat 626..662 CDD:293791 4/40 (10%)
WD40 repeat 669..692 CDD:293791 5/25 (20%)
Utp12 780..882 CDD:281932
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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