DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5543 and poc1a

DIOPT Version :9

Sequence 1:NP_611832.1 Gene:CG5543 / 37768 FlyBaseID:FBgn0034908 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_998214.1 Gene:poc1a / 406322 ZFINID:ZDB-GENE-040426-1993 Length:416 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5543NP_611832.1 WD40 <172..519 CDD:225201
WD40 180..497 CDD:295369
WD40 repeat 185..227 CDD:293791
WD40 repeat 233..268 CDD:293791
WD40 repeat 273..329 CDD:293791
WD40 repeat 337..374 CDD:293791
WD40 repeat 382..419 CDD:293791
WD40 repeat 427..469 CDD:293791
WD40 repeat 475..497 CDD:293791
poc1aNP_998214.1 WD40 10..298 CDD:238121
WD40 14..>300 CDD:225201
WD 1. /evidence=ECO:0000255 16..55
WD40 repeat 21..58 CDD:293791
WD 2. /evidence=ECO:0000255 58..97
WD40 repeat 64..100 CDD:293791
WD 3. /evidence=ECO:0000255 100..139
WD40 repeat 105..141 CDD:293791
WD 4. /evidence=ECO:0000255 142..181
WD40 repeat 148..182 CDD:293791
WD 5. /evidence=ECO:0000255 184..223
WD40 repeat 189..221 CDD:293791
WD 6. /evidence=ECO:0000255 226..265
WD40 repeat 231..267 CDD:293791
WD 7. /evidence=ECO:0000255 268..307
WD40 repeat 274..297 CDD:293791
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 311..340
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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