DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5543 and katnb1

DIOPT Version :9

Sequence 1:NP_611832.1 Gene:CG5543 / 37768 FlyBaseID:FBgn0034908 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_998183.1 Gene:katnb1 / 406291 ZFINID:ZDB-GENE-040426-1954 Length:694 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5543NP_611832.1 WD40 <172..519 CDD:225201
WD40 180..497 CDD:295369
WD40 repeat 185..227 CDD:293791
WD40 repeat 233..268 CDD:293791
WD40 repeat 273..329 CDD:293791
WD40 repeat 337..374 CDD:293791
WD40 repeat 382..419 CDD:293791
WD40 repeat 427..469 CDD:293791
WD40 repeat 475..497 CDD:293791
katnb1NP_998183.1 WD40 <3..295 CDD:225201
WD40 13..292 CDD:238121
WD 1 18..58
WD 2 61..100
WD40 repeat 67..103 CDD:293791
WD 3 103..142
WD40 repeat 108..144 CDD:293791
WD 4 145..186
WD40 repeat 151..186 CDD:293791
WD 5 188..226
WD40 repeat 192..228 CDD:293791
WD 6 229..269
WD40 repeat 234..268 CDD:293791
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 319..410
Rib_recp_KP_reg 346..476 CDD:282899
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 470..492
Katanin_con80 535..686 CDD:290636
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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