DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5543 and CG7611

DIOPT Version :9

Sequence 1:NP_611832.1 Gene:CG5543 / 37768 FlyBaseID:FBgn0034908 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001163489.1 Gene:CG7611 / 40386 FlyBaseID:FBgn0037094 Length:630 Species:Drosophila melanogaster


Alignment Length:554 Identity:100/554 - (18%)
Similarity:183/554 - (33%) Gaps:163/554 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ESTEASGNGGGFKKMDKEQMIR--QIEDVAEDLESQHLKEVMGISGFGRKAAKVFDINEQIEKAR 96
            :||.::.:|...:.::...:..  ..|:||.|            .|.|..:..:.|.|.....|.
  Fly     2 QSTSSTSSGSCSRPLEGSTLNSGGSAENVARD------------GGSGDDSVGIGDENPSGSSAA 54

  Fly    97 VTRPGMDKKRE--------ESKPKEDDQKDEEEEDVIGPLPPAVTTDKEKATKESSKDEDSDDDD 153
            ..  |.|.|..        .|....|.:.:.|.....|     |..||                 
  Fly    55 TN--GHDSKHNGFIVNNNGSSSRIVDGENNRENTSCSG-----VQLDK----------------- 95

  Fly   154 YSSDEDSDDEQSLAKRI-PYTHEVQMQHGSRAVLALAG----DPSGARLVSGSIDYDMCFWDFAG 213
                    ..|.:.:.| .|.|:|.:....:.::..:|    .||..:...     .:...|::.
  Fly    96 --------SNQEIIRLIGQYLHDVGLDKSVQTLMLESGCYLEHPSATKFRE-----HVLMGDWSK 147

  Fly   214 MDSSMRSFRQLQPCENHPIRSLQYSVTGDMILVISGNAQAKVLDRDG--FEKLECCKGDQYISDM 276
            .||.::....|  .:|..:.::.     :|..::......:.|| ||  .:.|...:.:  ::.:
  Fly   148 ADSDLKDLEPL--IDNGKLATIT-----EMKFILLEQKYLEHLD-DGNPLDALHVLRSE--LTPL 202

  Fly   277 SRTKGHVAQLTSGCWHPFNREQFLTAALDGTLRIWQGLKSK----EQLQV------------IKT 325
            ......|.||:|......|::.:..|..:|     :|:.|:    |:||.            ::|
  Fly   203 QHNITRVHQLSSYMMCSTNQDLYQRAKWEG-----KGILSRALVMERLQTFMPPSVMMSPRRLRT 262

  Fly   326 RAQGGLRTNAASCNFNRDATLIAAGCVDGSIQTWDTRKMFVN--TTHC----------VRDAHQK 378
            ..|..:...:..|           .|.|   ..|:|....|:  |.||          ::.....
  Fly   263 LLQQAVELQSQHC-----------PCHD---MAWETNLETVSLLTDHCCTTDGFPMQTIQILTDH 313

  Fly   379 GSEITSIVFSYMGQQLATRSNDETMKLWDLRQFKQPLHTWTNL--FSRYDTTDCCFSPDDRLLVT 441
            ..|:....||..|.:|||.|.|.|:.:||:..:|..|.....|  .::...:...:|||.:|::.
  Fly   314 CDEVWFCKFSPDGLKLATGSKDSTVIIWDVDPYKLTLKHRRVLDGQAQLSVSFVSWSPDSKLILV 378

  Fly   442 GESLPKGQAEAN-LYFYSTKSYEEVQRIPVS-------------------------------NAH 474
            |     |..::: ||.::....:.|.:...|                               |..
  Fly   379 G-----GTEDSHELYIWNVDDGKLVVKFSQSLEDSLACGAFSRDGARFVCGGQKGQLYLCDLNGT 438

  Fly   475 VVKTLWHPKLNQLFVSCGNGTIKCYYDEHRSIRG 508
            :|.:....::|.:.....|.||.. .|.|..|||
  Fly   439 IVDSWEGVRVNSIAFRADNKTILA-ADNHYRIRG 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5543NP_611832.1 WD40 <172..519 CDD:225201 76/405 (19%)
WD40 180..497 CDD:295369 67/384 (17%)
WD40 repeat 185..227 CDD:293791 7/45 (16%)
WD40 repeat 233..268 CDD:293791 6/36 (17%)
WD40 repeat 273..329 CDD:293791 13/71 (18%)
WD40 repeat 337..374 CDD:293791 9/48 (19%)
WD40 repeat 382..419 CDD:293791 13/36 (36%)
WD40 repeat 427..469 CDD:293791 9/42 (21%)
WD40 repeat 475..497 CDD:293791 4/21 (19%)
CG7611NP_001163489.1 CTLH 129..190 CDD:128914 12/73 (16%)
WD40 <303..605 CDD:225201 36/175 (21%)
WD40 307..602 CDD:295369 36/171 (21%)
WD40 repeat 318..358 CDD:293791 14/39 (36%)
WD40 repeat 364..402 CDD:293791 9/42 (21%)
WD40 repeat 410..444 CDD:293791 2/33 (6%)
WD40 repeat 448..534 CDD:293791 9/25 (36%)
WD40 repeat 577..602 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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