| Sequence 1: | NP_611832.1 | Gene: | CG5543 / 37768 | FlyBaseID: | FBgn0034908 | Length: | 655 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_082016.1 | Gene: | Poc1b / 382406 | MGIID: | 1918511 | Length: | 476 | Species: | Mus musculus |
| Alignment Length: | 484 | Identity: | 101/484 - (20%) |
|---|---|---|---|
| Similarity: | 164/484 - (33%) | Gaps: | 163/484 - (33%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 280 KGHVAQLTSGCWHPFNREQFLTAALDGTLRIWQGLKSKEQLQVIKTRAQG----GLRTNAASCNF 340
Fly 341 NRDATLIAAGCVDGSIQTWDTRKMFVNTTHCVRDAHQKGSE-------ITSIVFSYMGQQLATRS 398
Fly 399 NDETMKLWDLRQFKQPLHTWTNLFSRYDTTD---CC-FSPDDRLLVT------------------ 441
Fly 442 ------------------GESLPKGQAEANLYFYSTKSYEEVQRIPVSNAHVVKTLWHPKLNQLF 488
Fly 489 VSCGNGTIKCYYDEHRSIRGAKLCVVKTHRKRQPMEMVGVS-------------QII-------- 532
Fly 533 -----------------TPHALPLF-RQEKSRTSRKRM-----EKARMDPVKSQRPDLPITSGQG 574
Fly 575 GRVASS--------GGTLSSYVIRNL--------GLSKRVDDDQD-PREAILKYAKDAAENPYWI 622
Fly 623 APAYKQ--------TQPKAIFSEKLPADE 643 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG5543 | NP_611832.1 | WD40 | <172..519 | CDD:225201 | 67/289 (23%) |
| WD40 | 180..497 | CDD:295369 | 63/267 (24%) | ||
| WD40 repeat | 185..227 | CDD:293791 | |||
| WD40 repeat | 233..268 | CDD:293791 | |||
| WD40 repeat | 273..329 | CDD:293791 | 16/48 (33%) | ||
| WD40 repeat | 337..374 | CDD:293791 | 7/36 (19%) | ||
| WD40 repeat | 382..419 | CDD:293791 | 13/36 (36%) | ||
| WD40 repeat | 427..469 | CDD:293791 | 11/81 (14%) | ||
| WD40 repeat | 475..497 | CDD:293791 | 7/21 (33%) | ||
| Poc1b | NP_082016.1 | WD40 | 10..298 | CDD:238121 | 71/318 (22%) |
| WD40 | 14..>300 | CDD:225201 | 71/320 (22%) | ||
| WD 1 | 16..55 | 15/49 (31%) | |||
| WD40 repeat | 21..58 | CDD:293791 | 12/47 (26%) | ||
| WD 2 | 58..97 | 10/50 (20%) | |||
| WD40 repeat | 63..100 | CDD:293791 | 11/48 (23%) | ||
| WD 3 | 100..139 | 14/45 (31%) | |||
| WD40 repeat | 106..142 | CDD:293791 | 15/42 (36%) | ||
| WD 4 | 142..181 | 9/38 (24%) | |||
| WD40 repeat | 147..182 | CDD:293791 | 8/34 (24%) | ||
| WD 5 | 183..223 | 1/39 (3%) | |||
| WD40 repeat | 190..225 | CDD:293791 | 2/34 (6%) | ||
| WD 6 | 226..265 | 11/42 (26%) | |||
| WD40 repeat | 231..267 | CDD:293791 | 10/39 (26%) | ||
| WD 7 | 268..307 | 5/40 (13%) | |||
| WD40 repeat | 273..299 | CDD:293791 | 3/25 (12%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||