DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5543 and gpb-2

DIOPT Version :9

Sequence 1:NP_611832.1 Gene:CG5543 / 37768 FlyBaseID:FBgn0034908 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_492072.2 Gene:gpb-2 / 172483 WormBaseID:WBGene00001680 Length:369 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5543NP_611832.1 WD40 <172..519 CDD:225201
WD40 180..497 CDD:295369
WD40 repeat 185..227 CDD:293791
WD40 repeat 233..268 CDD:293791
WD40 repeat 273..329 CDD:293791
WD40 repeat 337..374 CDD:293791
WD40 repeat 382..419 CDD:293791
WD40 repeat 427..469 CDD:293791
WD40 repeat 475..497 CDD:293791
gpb-2NP_492072.2 WD40 74..369 CDD:238121
WD40 repeat 84..121 CDD:293791
WD40 repeat 127..167 CDD:293791
WD40 repeat 172..208 CDD:293791
WD40 repeat 215..252 CDD:293791
WD40 repeat 258..294 CDD:293791
WD40 repeat 302..338 CDD:293791
WD40 repeat 344..368 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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