DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5543 and WDR3

DIOPT Version :9

Sequence 1:NP_611832.1 Gene:CG5543 / 37768 FlyBaseID:FBgn0034908 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_006775.1 Gene:WDR3 / 10885 HGNCID:12755 Length:943 Species:Homo sapiens


Alignment Length:728 Identity:139/728 - (19%)
Similarity:250/728 - (34%) Gaps:247/728 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 DLESQHL--------KEVMG----------ISGFGRKAAKVFDIN--EQIEKARVTRPGMDKKRE 107
            ||::||.        .||.|          |:|......:|:||.  ::||......|   ||.:
Human   177 DLDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWDIAYLQEIEDPEEPDP---KKIK 238

  Fly   108 ESKPKEDD---------QKDEEEEDVI-------------------------GPLPPAVTTD--- 135
            .|.|...|         :.||..||.|                         |.:.....||   
Human   239 GSSPGIQDTLEAEDGAFETDEAPEDRILSCRKAGSIMREGRDRVVNLAVDKTGRILACHGTDSVL 303

  Fly   136 ----------------------KEKATKESSKDEDSDDDDYSSDEDSDDEQSLAKRIPYTHEVQ- 177
                                  ::||...|||.|: :|.:.:.:....||......|..:.::: 
Human   304 ELFCILSKKEIQKKMDKKMKKARKKAKLHSSKGEE-EDPEVNVEMSLQDEIQRVTNIKTSAKIKS 367

  Fly   178 -----MQHGS-RAVLALAGDPSGARLVSGSIDYDMCFWDFAGMDSSMRSFRQLQPCENHPIRSLQ 236
                 ..||. :||..|..:......::.|:.          ....:|:.|.........:|:|.
Human   368 FDLIHSPHGELKAVFLLQNNLVELYSLNPSLP----------TPQPVRTSRITIGGHRSDVRTLS 422

  Fly   237 YSVTGDMILVISGNAQA-KVLDRDGFEKLECCK--------------GDQYISDMSRT-KGHVAQ 285
            :|  .|.|.|:|..|.: |:.:|   ..|:|.:              ||:.:...::| |..:..
Human   423 FS--SDNIAVLSAAADSIKIWNR---STLQCIRTMTCEYALCSFFVPGDRQVVIGTKTGKLQLYD 482

  Fly   286 LTSG------------CW----HPFNREQFLTAALDGTLRIW------QGLKSKEQLQVIKTRAQ 328
            |.||            .|    .| ::..|:|...|.:::.|      ....::::|.|.:||..
Human   483 LASGNLLETIDAHDGALWSMSLSP-DQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTL 546

  Fly   329 GGLRTNAASCNFNRDATLIAAGCVDGSIQTW--DTRKMFVNTTHCVRDAHQKGSEITSIV--FSY 389
             .|..:....:::.:..|:|...:|.:::.:  ||.|.|::.         .|.::..|.  .|:
Human   547 -QLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSL---------YGHKLPVICMDISH 601

  Fly   390 MGQQLATRSNDETMKLWDLRQFKQPLHTWTNLFSRYDTTDC---CFSPDDRLLVTGESLPKGQAE 451
            .|..:||.|.|..:|:|.|                 |..||   .|:.||.::.. :.:||    
Human   602 DGALIATGSADRNVKIWGL-----------------DFGDCHKSLFAHDDSVMYL-QFVPK---- 644

  Fly   452 ANLYFYSTKSYEEVQRIPVSNAHVVKTL--WHPKLNQLFVS-CGNGTIKCYYDEHRSIRGAKLCV 513
            ::|:|.:.|.: ::::........::||  .|.::..|.|| .|:..:...:|  :|:|      
Human   645 SHLFFTAGKDH-KIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHD--KSLR------ 700

  Fly   514 VKTHRKRQPMEMVGVSQIITPHALPLFRQEKSRTSRKRMEKARMDPVKSQRPDLPITSGQGGRVA 578
             ...|.|:|:               :..:|:........|::   ..|..:|.:|      |...
Human   701 -LWERTREPL---------------ILEEEREMEREAEYEES---VAKEDQPAVP------GETQ 740

  Fly   579 SSGGTLSSYVIRNLGLSKRVDDDQDPREAILKYAKDAAE-------------------NPYWIAP 624
            ..........|..:..::|:      .|||..|.::.|:                   ||  |..
Human   741 GDSYFTGKKTIETVKAAERI------MEAIELYREETAKMKEHKAICKAAGKEVPLPSNP--ILM 797

  Fly   625 AYKQTQPKAIFSE 637
            ||....|.|...|
Human   798 AYGSISPSAYVLE 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5543NP_611832.1 WD40 <172..519 CDD:225201 77/401 (19%)
WD40 180..497 CDD:295369 74/365 (20%)
WD40 repeat 185..227 CDD:293791 5/41 (12%)
WD40 repeat 233..268 CDD:293791 12/35 (34%)
WD40 repeat 273..329 CDD:293791 15/78 (19%)
WD40 repeat 337..374 CDD:293791 7/38 (18%)
WD40 repeat 382..419 CDD:293791 10/38 (26%)
WD40 repeat 427..469 CDD:293791 10/44 (23%)
WD40 repeat 475..497 CDD:293791 7/24 (29%)
WDR3NP_006775.1 WD40 <21..104 CDD:225201
WD 1 21..60
WD40 47..>226 CDD:295369 12/48 (25%)
WD 2 63..102
WD40 repeat 68..104 CDD:293791
WD40 85..698 CDD:225201 113/575 (20%)
WD 3 105..144
WD40 repeat 111..146 CDD:293791
WD 4 147..186 4/8 (50%)
WD40 repeat 152..188 CDD:293791 4/10 (40%)
WD 5 189..228 9/38 (24%)
WD40 repeat 194..220 CDD:293791 5/25 (20%)
WD 6 277..316 3/38 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 326..345 7/19 (37%)
WD40 407..703 CDD:238121 70/343 (20%)
WD 7 413..451 12/42 (29%)
WD40 repeat 420..454 CDD:293791 11/38 (29%)
WD 8 453..493 7/39 (18%)
WD40 repeat 462..494 CDD:293791 7/31 (23%)
WD 9 494..533 6/39 (15%)
WD40 repeat 500..548 CDD:293791 10/49 (20%)
WD 10 547..586 8/38 (21%)
WD40 repeat 552..588 CDD:293791 7/44 (16%)
WD 11 589..630 14/57 (25%)
WD40 repeat 595..630 CDD:293791 13/51 (25%)
WD 12 631..670 7/44 (16%)
WD40 repeat 636..672 CDD:293791 6/41 (15%)
WD 13 673..712 11/62 (18%)
Utp12 804..905 CDD:281932 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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