DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5543 and wdr70

DIOPT Version :9

Sequence 1:NP_611832.1 Gene:CG5543 / 37768 FlyBaseID:FBgn0034908 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_021334902.1 Gene:wdr70 / 101884837 -ID:- Length:637 Species:Danio rerio


Alignment Length:644 Identity:313/644 - (48%)
Similarity:421/644 - (65%) Gaps:54/644 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 MIRQIEDVAEDLESQHLKEVMGISGFGRKAAKVFDINEQIEKARVT-------------RPGMDK 104
            |..|..|...|.:   |..|||.|||||| |:.||:....|:.|.|             :..:::
Zfish     1 MADQSSDAGADGD---LSSVMGFSGFGRK-ARTFDLEAMFEQTRRTAIERSQRVLEDREKQELEE 61

  Fly   105 KREESKP----KEDDQKDEEEEDVIGPLPPAVTTDKEKATKE----------------------S 143
            .|::.||    |:....||.:.||||||||....|.|....:                      |
Zfish    62 SRQKEKPSTSRKQQPDSDESDSDVIGPLPPPAQADDEDDDDDDEDDDDDDDGVVGPPLPPGFMRS 126

  Fly   144 SKDEDSDDDDYSSDEDSDDEQSLAKRIPYTHEVQMQHGSRAVLALAGDPSGARLVSGSIDYDMCF 208
            :.|||.|:|....::|.||:.:..|:||.|||:.:|||::.|.|||.||||||||:|..|||:.|
Zfish   127 TADEDDDEDGNEDEDDDDDDDNPVKKIPDTHEITLQHGTKTVSALALDPSGARLVTGGYDYDVRF 191

  Fly   209 WDFAGMDSSMRSFRQLQPCENHPIRSLQYSVTGDMILVISGNAQAKVLDRDGFEKLECCKGDQYI 273
            |||||||:::.:||.|||||.|.|::||||:|||:|||::||:||||||||||:.|||.||||||
Zfish   192 WDFAGMDANLHAFRSLQPCECHQIKALQYSITGDVILVVAGNSQAKVLDRDGFQVLECIKGDQYI 256

  Fly   274 SDMSRTKGHVAQLTSGCWHPFNREQFLTAALDGTLRIWQGLKSKEQLQVIKTRAQGGLRTNAASC 338
            .||:.||||.|.|..|||||..:|:|||.:.|||:|.|.....|:...|.|.|:|.|.|.....|
Zfish   257 VDMANTKGHTAMLNDGCWHPKIKEEFLTCSNDGTVRTWDLTSEKKHKSVFKPRSQQGKRVTPTCC 321

  Fly   339 NFNRDATLIAAGCVDGSIQTWDTRKMFVNTT-HCVRDAHQKGSEITSIVFSYMGQQLATRSNDET 402
            .::||..||||||.||:||.|| |.:.|:|. || |.||..||:.:|:.|||.|..||:|..|:|
Zfish   322 TYSRDGKLIAAGCQDGTIQIWD-RNLSVHTKFHC-RQAHAPGSDTSSLCFSYDGVTLASRGGDDT 384

  Fly   403 MKLWDLRQFKQPLHTWTNLFSRYDTTDCCFSPDDRLLVTGESLPKGQAEANLYFYSTKSYEEVQR 467
            :|.||:|.|:.||:..|.|.|.:..|||||||||:|||||.|:.|.:.:..|.|:..::.:::..
Zfish   385 LKTWDIRSFRSPLNVATGLTSFFPMTDCCFSPDDKLLVTGTSVRKDEGQGKLLFFQRETLQKLYE 449

  Fly   468 IPVSNAHVVKTLWHPKLNQLFVSCGNGTIKCYYDEHRSIRGAKLCVVKTHRKRQPMEMVGVSQII 532
            |.|::|.||:.||||||||:.|..|||..|.|||..:|.|||.|||||:.||.:..|.:....||
Zfish   450 IEVADASVVRCLWHPKLNQIMVGTGNGLAKVYYDPVKSQRGAILCVVKSKRKEKHAETLTQDYII 514

  Fly   533 TPHALPLFRQEKSRTSRKRMEKARMDPVKSQRPDLPITS-GQGGRVASSGGTLSSYVIRNLGLSK 596
            ||||||:||:.:.|::||::||.|:||:||.:|:.|::. |:|||||:.||||||::::|:.|.|
Zfish   515 TPHALPMFREARQRSTRKQLEKDRLDPLKSHKPEPPVSGPGRGGRVAAHGGTLSSFIVKNIALDK 579

  Fly   597 RVDDDQDPREAILKYAKDAAENPYWIAPAYKQTQPKAIFSEKL-----PADEPATKKPK 650
              .||.:||||||::||:||:||||:|||||:||||.:|:|:.     ..|||..||.|
Zfish   580 --TDDSNPREAILRHAKEAADNPYWVAPAYKKTQPKPLFAEEEEEEEDDKDEPEWKKRK 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5543NP_611832.1 WD40 <172..519 CDD:225201 192/347 (55%)
WD40 180..497 CDD:295369 175/317 (55%)
WD40 repeat 185..227 CDD:293791 28/41 (68%)
WD40 repeat 233..268 CDD:293791 25/34 (74%)
WD40 repeat 273..329 CDD:293791 27/55 (49%)
WD40 repeat 337..374 CDD:293791 20/37 (54%)
WD40 repeat 382..419 CDD:293791 17/36 (47%)
WD40 repeat 427..469 CDD:293791 18/41 (44%)
WD40 repeat 475..497 CDD:293791 14/21 (67%)
wdr70XP_021334902.1 U79_P34 <12..84 CDD:281109 22/75 (29%)
WD40 160..481 CDD:330360 177/322 (55%)
WD40 repeat 168..212 CDD:293791 30/43 (70%)
WD40 repeat 216..264 CDD:293791 34/47 (72%)
WD40 repeat 269..307 CDD:293791 17/37 (46%)
WD40 repeat 317..351 CDD:293791 17/34 (50%)
WD40 repeat 364..401 CDD:293791 17/36 (47%)
WD40 repeat 409..451 CDD:293791 18/41 (44%)
WD40 repeat 458..481 CDD:293791 14/22 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H9972
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177718at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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