DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Ssrp and 3xHMG-box2

DIOPT Version :9

Sequence 1:	NP_523830.2	Gene:	Ssrp / 37767	FlyBaseID:	FBgn0010278	Length:	723	Species:	Drosophila melanogaster
Sequence 2:	NP_194111.1	Gene:	3xHMG-box2 / 828480	AraportID:	AT4G23800	Length:	456	Species:	Arabidopsis thaliana

Alignment Length:	399	Identity:	106/399 - (26%)
Similarity:	162/399 - (40%)	Gaps:	96/399 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly   383 GGSTRSFDFEVTLKNGTVHIFSSIEK---EEYAKLFDYITQK---------------KLHVSNMG 429
            |.|.:||:.:: ::..|:.....|||   ||..|..|.|.:|               |:.:..:.
plant    38 GKSAKSFEQDL-MEMQTMLEKMKIEKDKTEELLKEKDEILRKKEEELETRDAEQEKLKVELKKLQ 101

  Fly   430 KDKSGYKDVDF--GDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAE 492
            |.|....::.|  |.|.        |.:.:.|...|::..|..::...|:.......:..::|.:
plant   102 KMKEFKPNMTFACGQSS--------LTQAEQEKANKKKKKDCPETKRPSSSYVLWCKDQWTEVKK 158

  Fly   493 EYDSNVESDSDDDSDASGGGGDSDGAKKKK---EKKSEKKE------KKEKKHKE---------K 539
            |   |.|:|..:.|:..|....|..|:.||   |:...:||      .|||:.||         |
plant   159 E---NPEADFKETSNILGAKWKSLSAEDKKPYEERYQVEKEAYLQVIAKEKREKEAMKLLEDDQK 220

  Fly   540 ERT-------------------KKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVTEI 585
            :||                   ||.:||:||..|||...:||:::.|:.|.:::.||.  .|.|:
plant   221 QRTAMELLDQYLNFVQEAEQDNKKKNKKEKDPLKPKHPVSAFLVYANERRAALREENK--SVVEV 283

  Fly   586 AKKGGEMWKELKDKSK--WEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRKTEPSPSK 648
            ||..||.||.|.||.|  :|..|.|:|:.|...|..||      ...|:...|.||.:.|.....
plant   284 AKITGEEWKNLSDKKKAPYEKVAKKNKETYLQAMEEYK------RTKEEEALSQKKEEEELLKLH 342

  Fly   649 KANTSGSGFKSKE----YISDDDSTSSDDEKDNEPAKKKSKPPS-----DGDAKKKKAKSESEPE 704
            |.... ...|.||    .|..:.:|.....::.:|.|.| ||.|     ..|.:||..      |
plant   343 KQEAL-QMLKKKEKTDNLIKKEKATKKKKNENVDPNKPK-KPASSYFLFSKDERKKLT------E 399

  Fly   705 ESEEDSNAS 713
            |....:||:
plant   400 ERPGTNNAT 408

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ssrp	NP_523830.2	POB3	20..499	CDD:227494	28/135 (21%)
		SSrecog	75..284	CDD:281523
		PH2_SSRP1-like	332..427	CDD:270051	15/61 (25%)
		HMG_box	557..620	CDD:278906	24/64 (38%)
3xHMG-box2	NP_194111.1	PTZ00121	<2..454	CDD:173412	106/399 (27%)
		HMGB-UBF_HMG-box	139..203	CDD:238686	15/66 (23%)
		HMG-box	255..320	CDD:381793	26/66 (39%)
		HMGB-UBF_HMG-box	379..444	CDD:238686	11/37 (30%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910