Sequence 1: | NP_523830.2 | Gene: | Ssrp / 37767 | FlyBaseID: | FBgn0010278 | Length: | 723 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_189515.1 | Gene: | HMG / 822505 | AraportID: | AT3G28730 | Length: | 646 | Species: | Arabidopsis thaliana |
Alignment Length: | 663 | Identity: | 243/663 - (36%) |
---|---|---|---|
Similarity: | 353/663 - (53%) | Gaps: | 51/663 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MTDSLEYNDINAEVRGVLCSGRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVF 65
Fly 66 TKGGVLHRFTGFRDSEHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFE 130
Fly 131 VPLSHVSQC-VTGKNEVTLEFHQNDDAPV----GLLEMRFHIP-----AVESAEEDPVDKFHQNV 185
Fly 186 MSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDS 250
Fly 251 RQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMG 315
Fly 316 KVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFA 380
Fly 381 R---SGGSTRSFDFEVTLKNGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKD---VD 439
Fly 440 FGDSDNENEPDAYLARLKAEAREKEEDDDDGDSDEESTDEDFKPNENESDVAEEYDSNVESDSDD 504
Fly 505 DSDASGGG-GDSDGAKKKKEKKSEKKEKKEKKHKEK--------ERTKKPSKKKKDSGKPKRATT 560
Fly 561 AFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKELK--DKSKWEDAAAKDKQRYHDEMRNYK-- 621
Fly 622 ----PEAGGDSDN 630 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ssrp | NP_523830.2 | POB3 | 20..499 | CDD:227494 | 178/494 (36%) |
SSrecog | 75..284 | CDD:281523 | 86/218 (39%) | ||
PH2_SSRP1-like | 332..427 | CDD:270051 | 37/97 (38%) | ||
HMG_box | 557..620 | CDD:278906 | 26/64 (41%) | ||
HMG | NP_189515.1 | POB3 | 7..440 | CDD:227494 | 161/432 (37%) |
HMGB-UBF_HMG-box | 564..627 | CDD:238686 | 26/62 (42%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 123 | 1.000 | Domainoid score | I1825 |
eggNOG | 1 | 0.900 | - | - | E1_COG5165 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H110735 | |
Inparanoid | 1 | 1.050 | 380 | 1.000 | Inparanoid score | I537 |
OMA | 1 | 1.010 | - | - | QHG54838 | |
OrthoDB | 1 | 1.010 | - | - | D915055at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003358 | |
OrthoInspector | 1 | 1.000 | - | - | oto4050 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101807 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR45849 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X2245 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.840 |